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Q31UF5 (Q31UF5_SHIBS) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Uridine phosphorylase RuleBase RU361131

EC=2.4.2.3 RuleBase RU361131
Gene names
Name:udp EMBL ABB68303.1
Ordered Locus Names:SBO_3845 EMBL ABB68303.1
OrganismShigella boydii serotype 4 (strain Sb227) [Complete proteome] [HAMAP] EMBL ABB68303.1
Taxonomic identifier300268 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeShigella

Protein attributes

Sequence length253 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis By similarity. RuleBase RU361131

Catalytic activity

Uridine + phosphate = uracil + alpha-D-ribose 1-phosphate. RuleBase RU361131

Pathway

Pyrimidine metabolism; UMP biosynthesis via salvage pathway; uracil from uridine (phosphorylase route): step 1/1. RuleBase RU361131

Sequence similarities

Belongs to the PNP/UDP phosphorylase family. RuleBase RU361131

Ontologies

Keywords
   Molecular functionGlycosyltransferase RuleBase RU361131 SAAS SAAS018017
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processUMP salvage

Inferred from electronic annotation. Source: UniProtKB-UniPathway

nucleotide catabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular_functionuridine phosphorylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q31UF5 [UniParc].

Last modified December 6, 2005. Version 1.
Checksum: 7446DE45BA1BE58D

FASTA25327,150
        10         20         30         40         50         60 
MSKSDVFHLG LTKNDLQGAT LAIVPGDPDR VEKIAALMDK PVKLASHREF TTWRAELDGK 

        70         80         90        100        110        120 
PVIVCSTGIG GPSTSIAVEE LAQLGIRTFL RIGTTGAIQP HINVGDVLVT TASVRLDGAS 

       130        140        150        160        170        180 
LHFAPLEFPA VADFECTTAL VEAAKSIGAT THVGVTASSD TFYPGQERYD TYSGRVVRHF 

       190        200        210        220        230        240 
KGSMEEWQAM GVMNYEMESA TLLTMCASQG LRAGMVAGVI VNRTQQEIPN AETMKQTESQ 

       250 
AVKIVVEAAR RLL 

« Hide

References

[1]"Genome dynamics and diversity of Shigella species, the etiologic agents of bacillary dysentery."
Yang F., Yang J., Zhang X., Chen L., Jiang Y., Yan Y., Tang X., Wang J., Xiong Z., Dong J., Xue Y., Zhu Y., Xu X., Sun L., Chen S., Nie H., Peng J., Xu J. expand/collapse author list , Wang Y., Yuan Z., Wen Y., Yao Z., Shen Y., Qiang B., Hou Y., Yu J., Jin Q.
Nucleic Acids Res. 33:6445-6458(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Sb227 EMBL ABB68303.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000036 Genomic DNA. Translation: ABB68303.1.
RefSeqYP_410131.1. NC_007613.1.

3D structure databases

ProteinModelPortalQ31UF5.
SMRQ31UF5. Positions 1-253.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING300268.SBO_3845.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABB68303; ABB68303; SBO_3845.
GeneID3782828.
KEGGsbo:SBO_3845.
PATRIC18687497. VBIShiBoy33460_4615.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2820.
HOGENOMHOG000274897.
KOK00757.
OMANVMNFEM.
OrthoDBEOG676Z3T.

Enzyme and pathway databases

BioCycSBOY300268:GJFL-3842-MONOMER.
UniPathwayUPA00574; UER00633.

Family and domain databases

Gene3D3.40.50.1580. 1 hit.
InterProIPR018017. Nucleoside_phosphorylase.
IPR018016. Nucleoside_phosphorylase_CS.
IPR000845. Nucleoside_phosphorylase_d.
IPR010058. Uridine_phosphorylase.
[Graphical view]
PANTHERPTHR21234. PTHR21234. 1 hit.
PfamPF01048. PNP_UDP_1. 1 hit.
[Graphical view]
SUPFAMSSF53167. SSF53167. 1 hit.
TIGRFAMsTIGR01718. Uridine-psphlse. 1 hit.
PROSITEPS01232. PNP_UDP_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ31UF5_SHIBS
AccessionPrimary (citable) accession number: Q31UF5
Entry history
Integrated into UniProtKB/TrEMBL: December 6, 2005
Last sequence update: December 6, 2005
Last modified: July 9, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)