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Protein
Submitted name:

Homoprotocatechuate dyoxygenase

Gene

hpaD

Organism
Shigella boydii serotype 4 (strain Sb227)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciSBOY300268:GJFL-4407-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Homoprotocatechuate dyoxygenaseImported
Gene namesi
Name:hpaDImported
Ordered Locus Names:SBO_4410Imported
OrganismiShigella boydii serotype 4 (strain Sb227)Imported
Taxonomic identifieri300268 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeShigella
ProteomesiUP000007067 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliQ31SY5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3384.
HOGENOMiHOG000179415.
KOiK00455.
OMAiVVFDVHW.
OrthoDBiEOG6HMXC8.

Family and domain databases

Gene3Di3.40.830.10. 1 hit.
InterProiIPR011984. DiOH_phenylAc_dOasedOase_Fe.
IPR004183. Xdiol_dOase_suB.
[Graphical view]
PfamiPF02900. LigB. 1 hit.
[Graphical view]
SUPFAMiSSF53213. SSF53213. 1 hit.
TIGRFAMsiTIGR02298. HpaD_Fe. 1 hit.

Sequencei

Sequence statusi: Complete.

Q31SY5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKLALAAKI THVPSMYLSE LPGKNHGCRQ GAIDGHKEIS KRCREMGVDT
60 70 80 90 100
IIVFDTHWLV NSAYHINCAD HFEGVYTSNE LPHFIRDMTY NYEGNPELGQ
110 120 130 140 150
LIADEALKLG VRAKAHNIPS LKLEYGTLVP MRYMNEDKHF KVVSISAFCT
160 170 180 190 200
VHDFADSRKL GEAILKAIEQ YDGTVAVLAS GSLSHRFIDD QRAEEGMNSY
210 220 230 240 250
TREFDRQMDE RVVKLWREGQ FKEFCNMLPE YADYCYGEGN MHDTVMLLGM
260 270 280
LGWDKYDGKV EFITELFPSS GTGQVNAVFP LPA
Length:283
Mass (Da):32,018
Last modified:December 6, 2005 - v1
Checksum:iDD02430970F96A1D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000036 Genomic DNA. Translation: ABB68823.1.
RefSeqiWP_000516990.1. NC_007613.1.

Genome annotation databases

EnsemblBacteriaiABB68823; ABB68823; SBO_4410.
KEGGisbo:SBO_4410.
PATRICi18688859. VBIShiBoy33460_5269.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000036 Genomic DNA. Translation: ABB68823.1.
RefSeqiWP_000516990.1. NC_007613.1.

3D structure databases

ProteinModelPortaliQ31SY5.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABB68823; ABB68823; SBO_4410.
KEGGisbo:SBO_4410.
PATRICi18688859. VBIShiBoy33460_5269.

Phylogenomic databases

eggNOGiCOG3384.
HOGENOMiHOG000179415.
KOiK00455.
OMAiVVFDVHW.
OrthoDBiEOG6HMXC8.

Enzyme and pathway databases

BioCyciSBOY300268:GJFL-4407-MONOMER.

Family and domain databases

Gene3Di3.40.830.10. 1 hit.
InterProiIPR011984. DiOH_phenylAc_dOasedOase_Fe.
IPR004183. Xdiol_dOase_suB.
[Graphical view]
PfamiPF02900. LigB. 1 hit.
[Graphical view]
SUPFAMiSSF53213. SSF53213. 1 hit.
TIGRFAMsiTIGR02298. HpaD_Fe. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Sb227Imported.

Entry informationi

Entry nameiQ31SY5_SHIBS
AccessioniPrimary (citable) accession number: Q31SY5
Entry historyi
Integrated into UniProtKB/TrEMBL: December 6, 2005
Last sequence update: December 6, 2005
Last modified: July 22, 2015
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.