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Q31SY5 (Q31SY5_SHIBS) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:hpaD EMBL ABB68823.1
Ordered Locus Names:SBO_4410 EMBL ABB68823.1
OrganismShigella boydii serotype 4 (strain Sb227) [Complete proteome] [HAMAP] EMBL ABB68823.1
Taxonomic identifier300268 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeShigella

Protein attributes

Sequence length283 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q31SY5 [UniParc].

Last modified December 6, 2005. Version 1.
Checksum: DD02430970F96A1D

FASTA28332,018
        10         20         30         40         50         60 
MGKLALAAKI THVPSMYLSE LPGKNHGCRQ GAIDGHKEIS KRCREMGVDT IIVFDTHWLV 

        70         80         90        100        110        120 
NSAYHINCAD HFEGVYTSNE LPHFIRDMTY NYEGNPELGQ LIADEALKLG VRAKAHNIPS 

       130        140        150        160        170        180 
LKLEYGTLVP MRYMNEDKHF KVVSISAFCT VHDFADSRKL GEAILKAIEQ YDGTVAVLAS 

       190        200        210        220        230        240 
GSLSHRFIDD QRAEEGMNSY TREFDRQMDE RVVKLWREGQ FKEFCNMLPE YADYCYGEGN 

       250        260        270        280 
MHDTVMLLGM LGWDKYDGKV EFITELFPSS GTGQVNAVFP LPA 

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References

[1]"Genome dynamics and diversity of Shigella species, the etiologic agents of bacillary dysentery."
Yang F., Yang J., Zhang X., Chen L., Jiang Y., Yan Y., Tang X., Wang J., Xiong Z., Dong J., Xue Y., Zhu Y., Xu X., Sun L., Chen S., Nie H., Peng J., Xu J. expand/collapse author list , Wang Y., Yuan Z., Wen Y., Yao Z., Shen Y., Qiang B., Hou Y., Yu J., Jin Q.
Nucleic Acids Res. 33:6445-6458(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Sb227 EMBL ABB68823.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000036 Genomic DNA. Translation: ABB68823.1.
RefSeqYP_410651.1. NC_007613.1.

3D structure databases

ProteinModelPortalQ31SY5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING300268.SBO_4410.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABB68823; ABB68823; SBO_4410.
GeneID3783393.
KEGGsbo:SBO_4410.
PATRIC18688859. VBIShiBoy33460_5269.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3384.
HOGENOMHOG000179415.
KOK00455.
OMAGCRDAAI.
OrthoDBEOG6HMXC8.

Enzyme and pathway databases

BioCycSBOY300268:GJFL-4407-MONOMER.

Family and domain databases

Gene3D3.40.830.10. 1 hit.
InterProIPR011984. DiOH_phenylAc_dOasedOase_Fe.
IPR004183. Xdiol_dOase_suB.
[Graphical view]
PfamPF02900. LigB. 1 hit.
[Graphical view]
SUPFAMSSF53213. SSF53213. 1 hit.
TIGRFAMsTIGR02298. HpaD_Fe. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ31SY5_SHIBS
AccessionPrimary (citable) accession number: Q31SY5
Entry history
Integrated into UniProtKB/TrEMBL: December 6, 2005
Last sequence update: December 6, 2005
Last modified: May 14, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)