Q31SY5 (Q31SY5_SHIBS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Homoprotocatechuate dyoxygenase EMBL ABB68823.1

Gene names

Name:	hpaD EMBL ABB68823.1
Ordered Locus Names:	SBO_4410 EMBL ABB68823.1

Organism

Shigella boydii serotype 4 (strain Sb227) [Complete proteome] [HAMAP] EMBL ABB68823.1

Taxonomic identifier

300268 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Shigella › Shigella boydii

Protein attributes

Sequence length	283 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	cellular aromatic compound metabolic process Inferred from electronic annotation. Source: InterPro oxidation-reduction process Inferred from electronic annotation. Source: GOC
Molecular_function	ferrous iron binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q31SY5 [UniParc]. Last modified December 6, 2005. Version 1. Checksum: DD02430970F96A1D	FASTA	283	32,018
	10 20 30 40 50 60 MGKLALAAKI THVPSMYLSE LPGKNHGCRQ GAIDGHKEIS KRCREMGVDT IIVFDTHWLV 70 80 90 100 110 120 NSAYHINCAD HFEGVYTSNE LPHFIRDMTY NYEGNPELGQ LIADEALKLG VRAKAHNIPS 130 140 150 160 170 180 LKLEYGTLVP MRYMNEDKHF KVVSISAFCT VHDFADSRKL GEAILKAIEQ YDGTVAVLAS 190 200 210 220 230 240 GSLSHRFIDD QRAEEGMNSY TREFDRQMDE RVVKLWREGQ FKEFCNMLPE YADYCYGEGN 250 260 270 280 MHDTVMLLGM LGWDKYDGKV EFITELFPSS GTGQVNAVFP LPA

References

[1]

"Genome dynamics and diversity of Shigella species, the etiologic agents of bacillary dysentery." Yang F., Yang J., Zhang X., Chen L., Jiang Y., Yan Y., Tang X., Wang J., Xiong Z., Dong J., Xue Y., Zhu Y., Xu X., Sun L., Chen S., Nie H., Peng J., Xu J. , Wang Y., Yuan Z., Wen Y., Yao Z., Shen Y., Qiang B., Hou Y., Yu J., Jin Q. Nucleic Acids Res. 33:6445-6458(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Sb227 EMBL ABB68823.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000036 Genomic DNA. Translation: ABB68823.1.
RefSeq	YP_410651.1. NC_007613.1.
3D structure databases
ProteinModelPortal	Q31SY5.
ModBase	Search...
Protein-protein interaction databases
STRING	300268.SBO_4410.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABB68823; ABB68823; SBO_4410.
GeneID	3783393.
KEGG	sbo:SBO_4410.
PATRIC	18688859. VBIShiBoy33460_5269.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3384.
HOGENOM	HOG000179415.
KO	K00455.
OMA	AKVTHVP.
ProtClustDB	CLSK868465.
Enzyme and pathway databases
BioCyc	SBOY300268:GJFL-4407-MONOMER.
Family and domain databases
Gene3D	3.40.830.10. 1 hit.
InterPro	IPR011984. DiOH_phenylAc_dOasedOase_Fe. IPR004183. Xdiol_dOase_suB. [Graphical view]
Pfam	PF02900. LigB. 1 hit. [Graphical view]
SUPFAM	SSF53213. Xdiol_dOase_3B. 1 hit.
TIGRFAMs	TIGR02298. HpaD_Fe. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q31SY5_SHIBS

Accession

Primary (citable) accession number: Q31SY5

Entry history

Integrated into UniProtKB/TrEMBL:	December 6, 2005
Last sequence update:	December 6, 2005
Last modified:	May 1, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)