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Q31L38 (Q31L38_SYNE7) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 61. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length406 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247 HAMAP-Rule MF_01201 SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188 HAMAP-Rule MF_01201

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site581Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2861Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1571Substrate By similarity HAMAP-Rule MF_01201
Binding site3341Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue581N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
Q31L38 [UniParc].

Last modified December 6, 2005. Version 1.
Checksum: B78C62AF3960B429

FASTA40643,771
        10         20         30         40         50         60 
MTVKPIDPQP TPRWPARRLE QLSYQRAWVE VDQGAIAANT RQIRQFLAPS CELMAVVKAD 

        70         80         90        100        110        120 
AYGHGAVAIA STVLGAGATA LGVATIPEGV RLREAGITAP ILLLGSIHSP DEVQAIAHWQ 

       130        140        150        160        170        180 
IQPSLSTPKQ ALICAEVLDR LGQSLPVHLK LDTGMSRLGA PWQTAVEFLQ LVHGLPSLQL 

       190        200        210        220        230        240 
ASLYSHFATA DSPDRAPLQQ QHAAFEQAIA QIQAEGLPVP KLHIANSAAT LLDSSLHYDQ 

       250        260        270        280        290        300 
VRVGLALYGL YPAPHLGDRL SLYPALSVKA RVTHVTTLPA GQGVSYGHRY VTQRETPIAV 

       310        320        330        340        350        360 
VGIGYADGVP RALSNQMEVL YRGQRLPQIG AITMDQMMID ISAMPQLAPG DVVTLLGRSG 

       370        380        390        400 
SEQITADDWA DRANTISWEI LCGFKDRLPR FAVAADWSSN QVTVRS

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References

[1]"Complete sequence of chromosome 1 of Synechococcus elongatus PCC 7942."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Richardson P.
Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 7942.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000100 Genomic DNA. Translation: ABB58231.1.
RefSeqYP_401218.1. NC_007604.1.

3D structure databases

ProteinModelPortalQ31L38.
ModBaseSearch...

Protein-protein interaction databases

STRING1140.Synpcc7942_2201.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABB58231; ABB58231; Synpcc7942_2201.
GeneID3773758.
KEGGsyf:Synpcc7942_2201.
PATRIC23789917. VBISynElo51371_2478.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031444.
KOK01775.
ProtClustDBPRK00053.

Enzyme and pathway databases

BioCycSYNEL:SYNPCC7942_2201-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ31L38_SYNE7
AccessionPrimary (citable) accession number: Q31L38
Entry history
Integrated into UniProtKB/TrEMBL: December 6, 2005
Last sequence update: December 6, 2005
Last modified: May 29, 2013
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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