Q31HN5 (Q31HN5_THICR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Flagellar biosynthetic protein fliR RuleBase RU003842

Gene names

Ordered Locus Names:

Tcr_0742

Organism

Thiomicrospira crunogena (strain XCL-2) [Complete proteome] [HAMAP] EMBL ABB41338.1

Taxonomic identifier

317025 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Thiotrichales › Piscirickettsiaceae › Thiomicrospira › Thiomicrospira crunogena

Protein attributes

Sequence length	247 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Role in flagellar biosynthesis By similarity. RuleBase RU003842
Subcellular location	Membrane; Multi-pass membrane protein By similarity RuleBase RU003841.
Sequence similarities	Belongs to the fliR/mopE/spaR family. RuleBase RU003841

Ontologies

Keywords
Cellular component	Bacterial flagellum RuleBase RU003842 Cell projection Cilium Flagellum EMBL ABB41338.1 Membrane
Domain	Transmembrane RuleBase RU003841
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	protein targeting Inferred from electronic annotation. Source: InterPro
Cellular_component	bacterial-type flagellum Inferred from electronic annotation. Source: UniProtKB-KW integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q31HN5 [UniParc]. Last modified December 6, 2005. Version 1. Checksum: 7AFCA252A7CC61DB	FASTA	247	26,630
	10 20 30 40 50 60 MGLYFWPFIR ISGMLLMVPI LSGSYVPMNV RLLLAVFITF AVAPSLALPP PVDPFTWHGI 70 80 90 100 110 120 LLIVQQLGIG VAIGLIFALI FQAFVIAGHL ASMSMGLAMA SMVDPATGVN TPIIGRYFTI 130 140 150 160 170 180 IATLLFLLMN GHVLVFKAVL QSFETLPIGL HFFTQDSLKL IYGFGSQMFE SGVTIALPLV 190 200 210 220 230 240 TALLLVNIAF GVVARAAPAL NIFAVGFPVT LLVGLIMLVF ITPLLYPNLQ ILMKATVELL AQLKLNS

References

[1]

"The genome of deep-sea vent chemolithoautotroph Thiomicrospira crunogena XCL-2." Scott K.M., Sievert S.M., Abril F.N., Ball L.A., Barrett C.J., Blake R.A., Boller A.J., Chain P.S.G., Clark J.A., Davis C.R., Detter C., Do K.F., Dobrinski K.P., Faza B.I., Fitzpatrick K.A., Freyermuth S.K., Harmer T.L., Hauser L.J. , Huegler M., Kerfeld C.A., Klotz M.G., Kong W.W., Land M., Lapidus A., Larimer F.W., Longo D.L., Lucas S., Malfatti S.A., Massey S.E., Martin D.D., McCuddin Z., Meyer F., Moore J.L., Ocampo L.H. Jr., Paul J.H., Paulsen I.T., Reep D.K., Ren Q., Ross R.L., Sato P.Y., Thomas P., Tinkham L.E., Zeruth G.T. PLoS Biol. 4:1-17(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: XCL-2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000109 Genomic DNA. Translation: ABB41338.1.
RefSeq	YP_391012.1. NC_007520.2.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	317025.Tcr_0742.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABB41338; ABB41338; Tcr_0742.
GeneID	3760885.
KEGG	tcx:Tcr_0742.
PATRIC	23973416. VBIThiCru83387_0769.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1684.
HOGENOM	HOG000253545.
KO	K02421.
OMA	QLNIFAI.
Family and domain databases
InterPro	IPR006303. FliR. IPR002010. T3SS_IM_R. [Graphical view]
Pfam	PF01311. Bac_export_1. 1 hit. [Graphical view]
PRINTS	PR00953. TYPE3IMRPROT.
TIGRFAMs	TIGR01400. fliR. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q31HN5_THICR

Accession

Primary (citable) accession number: Q31HN5

Entry history

Integrated into UniProtKB/TrEMBL:	December 6, 2005
Last sequence update:	December 6, 2005
Last modified:	May 1, 2013
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)