Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q31F09

- Q31F09_THICR

UniProt

Q31F09 - Q31F09_THICR

Protein
Submitted name:

ATP dependent DNA ligase, central

Gene

Tcr_1672

Organism
Thiomicrospira crunogena (strain XCL-2)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 63 (01 Oct 2014)
      Sequence version 1 (06 Dec 2005)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciTCRU317025:GHE8-1715-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligase, centralImported
    Gene namesi
    Ordered Locus Names:Tcr_1672Imported
    OrganismiThiomicrospira crunogena (strain XCL-2)Imported
    Taxonomic identifieri317025 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaThiotrichalesPiscirickettsiaceaeThiomicrospira
    ProteomesiUP000002713: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi317025.Tcr_1672.

    Structurei

    3D structure databases

    ProteinModelPortaliQ31F09.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000293070.
    KOiK01971.
    OMAiGKGQFEN.
    OrthoDBiEOG60919Q.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q31F09-1 [UniParc]FASTAAdd to Basket

    « Hide

    MATAYADAKK PKMLLLETYQ ENQSVLGWWM SEKLDGVRAK WNGKALISRG    50
    GHEIHAPDWF VADLPAFELD GELWTTRQDF ENVVSIVRQQ HPDSRWDAVS 100
    YQIFEVPNQL GNLMDRLAVL KNYLAKHQLT HVQIIPQTKI ISEAQLTSEF 150
    DRLTEIGAEG LVLRAPNQSY ETGRSRQALK MKAYEDDECQ VVGYKPGKGK 200
    ISGLVGALLC DWHGKMQLSI GSGLSLQERE HPPEIGQWIT FKYYGLTGSG 250
    KPRFPVFMRI RLDQDM 266
    Length:266
    Mass (Da):30,249
    Last modified:December 6, 2005 - v1
    Checksum:i3934005C2F46331E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000109 Genomic DNA. Translation: ABB42264.1.
    RefSeqiYP_391938.1. NC_007520.2.

    Genome annotation databases

    EnsemblBacteriaiABB42264; ABB42264; Tcr_1672.
    GeneIDi3760950.
    KEGGitcx:Tcr_1672.
    PATRICi23975418. VBIThiCru83387_1745.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000109 Genomic DNA. Translation: ABB42264.1 .
    RefSeqi YP_391938.1. NC_007520.2.

    3D structure databases

    ProteinModelPortali Q31F09.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 317025.Tcr_1672.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABB42264 ; ABB42264 ; Tcr_1672 .
    GeneIDi 3760950.
    KEGGi tcx:Tcr_1672.
    PATRICi 23975418. VBIThiCru83387_1745.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000293070.
    KOi K01971.
    OMAi GKGQFEN.
    OrthoDBi EOG60919Q.

    Enzyme and pathway databases

    BioCyci TCRU317025:GHE8-1715-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: XCL-2Imported.

    Entry informationi

    Entry nameiQ31F09_THICR
    AccessioniPrimary (citable) accession number: Q31F09
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 6, 2005
    Last sequence update: December 6, 2005
    Last modified: October 1, 2014
    This is version 63 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3