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Q31F09

- Q31F09_THICR

UniProt

Q31F09 - Q31F09_THICR

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Protein
Submitted name: ATP dependent DNA ligase, central
Gene
Tcr_1672
Organism
Thiomicrospira crunogena (strain XCL-2)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciTCRU317025:GHE8-1715-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligase, centralImported
Gene namesi
Ordered Locus Names:Tcr_1672Imported
OrganismiThiomicrospira crunogena (strain XCL-2)Imported
Taxonomic identifieri317025 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaThiotrichalesPiscirickettsiaceaeThiomicrospira
ProteomesiUP000002713: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi317025.Tcr_1672.

Structurei

3D structure databases

ProteinModelPortaliQ31F09.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000293070.
KOiK01971.
OMAiGKGQFEN.
OrthoDBiEOG60919Q.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q31F09-1 [UniParc]FASTAAdd to Basket

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MATAYADAKK PKMLLLETYQ ENQSVLGWWM SEKLDGVRAK WNGKALISRG    50
GHEIHAPDWF VADLPAFELD GELWTTRQDF ENVVSIVRQQ HPDSRWDAVS 100
YQIFEVPNQL GNLMDRLAVL KNYLAKHQLT HVQIIPQTKI ISEAQLTSEF 150
DRLTEIGAEG LVLRAPNQSY ETGRSRQALK MKAYEDDECQ VVGYKPGKGK 200
ISGLVGALLC DWHGKMQLSI GSGLSLQERE HPPEIGQWIT FKYYGLTGSG 250
KPRFPVFMRI RLDQDM 266
Length:266
Mass (Da):30,249
Last modified:December 6, 2005 - v1
Checksum:i3934005C2F46331E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000109 Genomic DNA. Translation: ABB42264.1.
RefSeqiYP_391938.1. NC_007520.2.

Genome annotation databases

EnsemblBacteriaiABB42264; ABB42264; Tcr_1672.
GeneIDi3760950.
KEGGitcx:Tcr_1672.
PATRICi23975418. VBIThiCru83387_1745.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000109 Genomic DNA. Translation: ABB42264.1 .
RefSeqi YP_391938.1. NC_007520.2.

3D structure databases

ProteinModelPortali Q31F09.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 317025.Tcr_1672.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABB42264 ; ABB42264 ; Tcr_1672 .
GeneIDi 3760950.
KEGGi tcx:Tcr_1672.
PATRICi 23975418. VBIThiCru83387_1745.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000293070.
KOi K01971.
OMAi GKGQFEN.
OrthoDBi EOG60919Q.

Enzyme and pathway databases

BioCyci TCRU317025:GHE8-1715-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: XCL-2.

Entry informationi

Entry nameiQ31F09_THICR
AccessioniPrimary (citable) accession number: Q31F09
Entry historyi
Integrated into UniProtKB/TrEMBL: December 6, 2005
Last sequence update: December 6, 2005
Last modified: June 11, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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