ID   Q31BF2_PROM9            Unreviewed;       546 AA.
AC   Q31BF2;
DT   06-DEC-2005, integrated into UniProtKB/TrEMBL.
DT   06-DEC-2005, sequence version 1.
DT   27-MAR-2024, entry version 93.
DE   RecName: Full=DNA ligase (ATP) {ECO:0000256|ARBA:ARBA00012727};
DE            EC=6.5.1.1 {ECO:0000256|ARBA:ARBA00012727};
GN   OrderedLocusNames=PMT9312_0733 {ECO:0000313|EMBL:ABB49793.1};
OS   Prochlorococcus marinus (strain MIT 9312).
OC   Bacteria; Cyanobacteriota; Cyanophyceae; Synechococcales;
OC   Prochlorococcaceae; Prochlorococcus.
OX   NCBI_TaxID=74546 {ECO:0000313|EMBL:ABB49793.1, ECO:0000313|Proteomes:UP000002715};
RN   [1] {ECO:0000313|Proteomes:UP000002715}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MIT 9312 {ECO:0000313|Proteomes:UP000002715};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T.,
RA   Hammon N., Israni S., Pitluck S., Thiel J., Schmutz J., Larimer F.,
RA   Land M., Kyrpides N., Lykidis A., Richardson P.;
RT   "Complete sequence of Prochlorococcus marinus str. MIT 9312.";
RL   Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + (deoxyribonucleotide)n-3'-hydroxyl + 5'-phospho-
CC         (deoxyribonucleotide)m = (deoxyribonucleotide)n+m + AMP +
CC         diphosphate.; EC=6.5.1.1; Evidence={ECO:0000256|ARBA:ARBA00034003};
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DR   EMBL; CP000111; ABB49793.1; -; Genomic_DNA.
DR   RefSeq; WP_011376288.1; NC_007577.1.
DR   AlphaFoldDB; Q31BF2; -.
DR   SMR; Q31BF2; -.
DR   STRING; 74546.PMT9312_0733; -.
DR   KEGG; pmi:PMT9312_0733; -.
DR   eggNOG; COG1793; Bacteria.
DR   HOGENOM; CLU_005138_6_2_3; -.
DR   OrthoDB; 9767858at2; -.
DR   Proteomes; UP000002715; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:UniProtKB-EC.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR   CDD; cd07897; Adenylation_DNA_ligase_Bac1; 1.
DR   CDD; cd07972; OBF_DNA_ligase_Arch_LigB; 1.
DR   Gene3D; 1.10.3260.10; DNA ligase, ATP-dependent, N-terminal domain; 1.
DR   Gene3D; 3.30.470.30; DNA ligase/mRNA capping enzyme; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   InterPro; IPR026333; ATP_dep_DNA_lig_pp_1105_fam.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR016059; DNA_ligase_ATP-dep_CS.
DR   InterPro; IPR012308; DNA_ligase_ATP-dep_N.
DR   InterPro; IPR036599; DNA_ligase_N_sf.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   NCBIfam; TIGR04120; DNA_lig_bact; 1.
DR   PANTHER; PTHR45674; DNA LIGASE 1/3 FAMILY MEMBER; 1.
DR   PANTHER; PTHR45674:SF13; DNA LIGASE-RELATED; 1.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF04675; DNA_ligase_A_N; 1.
DR   SUPFAM; SSF117018; ATP-dependent DNA ligase DNA-binding domain; 1.
DR   SUPFAM; SSF56091; DNA ligase/mRNA capping enzyme, catalytic domain; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   PROSITE; PS00697; DNA_LIGASE_A1; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   DNA replication {ECO:0000256|ARBA:ARBA00022705};
KW   Ligase {ECO:0000256|ARBA:ARBA00022598, ECO:0000313|EMBL:ABB49793.1};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741}.
FT   DOMAIN          313..450
FT                   /note="ATP-dependent DNA ligase family profile"
FT                   /evidence="ECO:0000259|PROSITE:PS50160"
SQ   SEQUENCE   546 AA;  64038 MW;  7DFBCDEFCA8D2362 CRC64;
     MSLKNFSELF LDLDSSNSTN NKIEVLKNYF LSNDPIDNSW AINLLTGKSN KRFISGRYLK
     NLFSQIYEYP EWLIDTCYLK VGDSAEVITL LLKNKSTSKK KKLSNISLNE LLSKTIPDLS
     KLNEEEKNFK IKNMWETLPE DNHLIFNKIL TGTFRVGVSI GLITKSISKL INIDEEIISH
     RLMGNFEPSI DSYEFLINKN INLQELNSKP FPFLLANTIE DKIFKHSIND FQFEWKYDGI
     RMQLIKRSGN VSLWTRGQEL VNESFPELVE KMSHIKDDFV LDGELLVWNF KEQIAFDFSF
     LQKRINRKSP TRSIQLKYPI IFIAYDLLEI NGRDIREIKL ENRRIELEKY FSKWQNKTEN
     DISDIFKICD LIFPKDWPDA LTYREKSREN NTEGLIIKKK TSIYSPGRKK GIWWKYKVDP
     MQLDAVLIYA KGGSGRRAGL YTDYSFALWK DQELIKFASA YSGLTNIEIK ELDKWIRNNT
     IEKFGPVRSL KPEMVFEISF EKIQISKRHK SGIAVRFPRI TKWRKDKKIN DADSLENAYA
     LMKKIS
//