Q31BF2 (Q31BF2_PROM9) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase-like protein EMBL ABB49793.1

Gene names

Ordered Locus Names:

PMT9312_0733

Organism

Prochlorococcus marinus (strain MIT 9312) [Complete proteome] [HAMAP] EMBL ABB49793.1

Taxonomic identifier

74546 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Cyanobacteria › Prochlorales › Prochlorococcaceae › Prochlorococcus › Prochlorococcus marinus

Protein attributes

Sequence length	546 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABB49793.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q31BF2 [UniParc]. Last modified December 6, 2005. Version 1. Checksum: 7DFBCDEFCA8D2362	FASTA	546	64,038
	10 20 30 40 50 60 MSLKNFSELF LDLDSSNSTN NKIEVLKNYF LSNDPIDNSW AINLLTGKSN KRFISGRYLK 70 80 90 100 110 120 NLFSQIYEYP EWLIDTCYLK VGDSAEVITL LLKNKSTSKK KKLSNISLNE LLSKTIPDLS 130 140 150 160 170 180 KLNEEEKNFK IKNMWETLPE DNHLIFNKIL TGTFRVGVSI GLITKSISKL INIDEEIISH 190 200 210 220 230 240 RLMGNFEPSI DSYEFLINKN INLQELNSKP FPFLLANTIE DKIFKHSIND FQFEWKYDGI 250 260 270 280 290 300 RMQLIKRSGN VSLWTRGQEL VNESFPELVE KMSHIKDDFV LDGELLVWNF KEQIAFDFSF 310 320 330 340 350 360 LQKRINRKSP TRSIQLKYPI IFIAYDLLEI NGRDIREIKL ENRRIELEKY FSKWQNKTEN 370 380 390 400 410 420 DISDIFKICD LIFPKDWPDA LTYREKSREN NTEGLIIKKK TSIYSPGRKK GIWWKYKVDP 430 440 450 460 470 480 MQLDAVLIYA KGGSGRRAGL YTDYSFALWK DQELIKFASA YSGLTNIEIK ELDKWIRNNT 490 500 510 520 530 540 IEKFGPVRSL KPEMVFEISF EKIQISKRHK SGIAVRFPRI TKWRKDKKIN DADSLENAYA LMKKIS

References

[1]

"Complete sequence of Prochlorococcus marinus str. MIT 9312." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Thiel J., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Richardson P. Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MIT 9312.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000111 Genomic DNA. Translation: ABB49793.1.
RefSeq	YP_397229.1. NC_007577.1.
3D structure databases
ProteinModelPortal	Q31BF2.
ModBase	Search...
Protein-protein interaction databases
STRING	74546.PMT9312_0733.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABB49793; ABB49793; PMT9312_0733.
GeneID	3765533.
KEGG	pmi:PMT9312_0733.
PATRIC	23005200. VBIProMar70153_0779.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000036007.
KO	K01971.
OMA	NEDNKLD.
ProtClustDB	PRK09247.
Enzyme and pathway databases
BioCyc	PMAR74546:GHRG-779-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q31BF2_PROM9

Accession

Primary (citable) accession number: Q31BF2

Entry history

Integrated into UniProtKB/TrEMBL:	December 6, 2005
Last sequence update:	December 6, 2005
Last modified:	May 1, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)