Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

ATP-dependent DNA ligase-like protein

Gene

PMT9312_0733

Organism
Prochlorococcus marinus (strain MIT 9312)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPMAR74546:GHRG-753-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligase-like proteinImported
Gene namesi
Ordered Locus Names:PMT9312_0733Imported
OrganismiProchlorococcus marinus (strain MIT 9312)Imported
Taxonomic identifieri74546 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus
ProteomesiUP000002715 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi74546.PMT9312_0733.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK10747.
OMAiMILDSEI.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q31BF2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLKNFSELF LDLDSSNSTN NKIEVLKNYF LSNDPIDNSW AINLLTGKSN
60 70 80 90 100
KRFISGRYLK NLFSQIYEYP EWLIDTCYLK VGDSAEVITL LLKNKSTSKK
110 120 130 140 150
KKLSNISLNE LLSKTIPDLS KLNEEEKNFK IKNMWETLPE DNHLIFNKIL
160 170 180 190 200
TGTFRVGVSI GLITKSISKL INIDEEIISH RLMGNFEPSI DSYEFLINKN
210 220 230 240 250
INLQELNSKP FPFLLANTIE DKIFKHSIND FQFEWKYDGI RMQLIKRSGN
260 270 280 290 300
VSLWTRGQEL VNESFPELVE KMSHIKDDFV LDGELLVWNF KEQIAFDFSF
310 320 330 340 350
LQKRINRKSP TRSIQLKYPI IFIAYDLLEI NGRDIREIKL ENRRIELEKY
360 370 380 390 400
FSKWQNKTEN DISDIFKICD LIFPKDWPDA LTYREKSREN NTEGLIIKKK
410 420 430 440 450
TSIYSPGRKK GIWWKYKVDP MQLDAVLIYA KGGSGRRAGL YTDYSFALWK
460 470 480 490 500
DQELIKFASA YSGLTNIEIK ELDKWIRNNT IEKFGPVRSL KPEMVFEISF
510 520 530 540
EKIQISKRHK SGIAVRFPRI TKWRKDKKIN DADSLENAYA LMKKIS
Length:546
Mass (Da):64,038
Last modified:December 5, 2005 - v1
Checksum:i7DFBCDEFCA8D2362
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000111 Genomic DNA. Translation: ABB49793.1.
RefSeqiYP_397229.1. NC_007577.1.

Genome annotation databases

EnsemblBacteriaiABB49793; ABB49793; PMT9312_0733.
KEGGipmi:PMT9312_0733.
PATRICi23005200. VBIProMar70153_0779.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000111 Genomic DNA. Translation: ABB49793.1.
RefSeqiYP_397229.1. NC_007577.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi74546.PMT9312_0733.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABB49793; ABB49793; PMT9312_0733.
KEGGipmi:PMT9312_0733.
PATRICi23005200. VBIProMar70153_0779.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK10747.
OMAiMILDSEI.
OrthoDBiEOG6Q8HXT.

Enzyme and pathway databases

BioCyciPMAR74546:GHRG-753-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Prochlorococcus marinus str. MIT 9312."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Thiel J., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Richardson P.
    Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MIT 9312Imported.

Entry informationi

Entry nameiQ31BF2_PROM9
AccessioniPrimary (citable) accession number: Q31BF2
Entry historyi
Integrated into UniProtKB/TrEMBL: December 5, 2005
Last sequence update: December 5, 2005
Last modified: March 31, 2015
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.