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Q31BF2

- Q31BF2_PROM9

UniProt

Q31BF2 - Q31BF2_PROM9

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Protein
Submitted name: ATP-dependent DNA ligase-like protein
Gene
PMT9312_0733
Organism
Prochlorococcus marinus (strain MIT 9312)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPMAR74546:GHRG-753-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligase-like proteinImported
Gene namesi
Ordered Locus Names:PMT9312_0733Imported
OrganismiProchlorococcus marinus (strain MIT 9312)Imported
Taxonomic identifieri74546 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus
ProteomesiUP000002715: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi74546.PMT9312_0733.

Structurei

3D structure databases

ProteinModelPortaliQ31BF2.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiNRHKSGV.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q31BF2-1 [UniParc]FASTAAdd to Basket

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MSLKNFSELF LDLDSSNSTN NKIEVLKNYF LSNDPIDNSW AINLLTGKSN    50
KRFISGRYLK NLFSQIYEYP EWLIDTCYLK VGDSAEVITL LLKNKSTSKK 100
KKLSNISLNE LLSKTIPDLS KLNEEEKNFK IKNMWETLPE DNHLIFNKIL 150
TGTFRVGVSI GLITKSISKL INIDEEIISH RLMGNFEPSI DSYEFLINKN 200
INLQELNSKP FPFLLANTIE DKIFKHSIND FQFEWKYDGI RMQLIKRSGN 250
VSLWTRGQEL VNESFPELVE KMSHIKDDFV LDGELLVWNF KEQIAFDFSF 300
LQKRINRKSP TRSIQLKYPI IFIAYDLLEI NGRDIREIKL ENRRIELEKY 350
FSKWQNKTEN DISDIFKICD LIFPKDWPDA LTYREKSREN NTEGLIIKKK 400
TSIYSPGRKK GIWWKYKVDP MQLDAVLIYA KGGSGRRAGL YTDYSFALWK 450
DQELIKFASA YSGLTNIEIK ELDKWIRNNT IEKFGPVRSL KPEMVFEISF 500
EKIQISKRHK SGIAVRFPRI TKWRKDKKIN DADSLENAYA LMKKIS 546
Length:546
Mass (Da):64,038
Last modified:December 6, 2005 - v1
Checksum:i7DFBCDEFCA8D2362
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000111 Genomic DNA. Translation: ABB49793.1.
RefSeqiYP_397229.1. NC_007577.1.

Genome annotation databases

EnsemblBacteriaiABB49793; ABB49793; PMT9312_0733.
GeneIDi3765533.
KEGGipmi:PMT9312_0733.
PATRICi23005200. VBIProMar70153_0779.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000111 Genomic DNA. Translation: ABB49793.1 .
RefSeqi YP_397229.1. NC_007577.1.

3D structure databases

ProteinModelPortali Q31BF2.
ModBasei Search...

Protein-protein interaction databases

STRINGi 74546.PMT9312_0733.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABB49793 ; ABB49793 ; PMT9312_0733 .
GeneIDi 3765533.
KEGGi pmi:PMT9312_0733.
PATRICi 23005200. VBIProMar70153_0779.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi NRHKSGV.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci PMAR74546:GHRG-753-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Prochlorococcus marinus str. MIT 9312."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Thiel J., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Richardson P.
    Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MIT 9312.

Entry informationi

Entry nameiQ31BF2_PROM9
AccessioniPrimary (citable) accession number: Q31BF2
Entry historyi
Integrated into UniProtKB/TrEMBL: December 6, 2005
Last sequence update: December 6, 2005
Last modified: May 14, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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