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Q31BF2

- Q31BF2_PROM9

UniProt

Q31BF2 - Q31BF2_PROM9

Protein
Submitted name:

ATP-dependent DNA ligase-like protein

Gene

PMT9312_0733

Organism
Prochlorococcus marinus (strain MIT 9312)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 54 (01 Oct 2014)
      Sequence version 1 (06 Dec 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciPMAR74546:GHRG-753-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligase-like proteinImported
    Gene namesi
    Ordered Locus Names:PMT9312_0733Imported
    OrganismiProchlorococcus marinus (strain MIT 9312)Imported
    Taxonomic identifieri74546 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus
    ProteomesiUP000002715: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi74546.PMT9312_0733.

    Structurei

    3D structure databases

    ProteinModelPortaliQ31BF2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiNRHKSGV.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q31BF2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSLKNFSELF LDLDSSNSTN NKIEVLKNYF LSNDPIDNSW AINLLTGKSN    50
    KRFISGRYLK NLFSQIYEYP EWLIDTCYLK VGDSAEVITL LLKNKSTSKK 100
    KKLSNISLNE LLSKTIPDLS KLNEEEKNFK IKNMWETLPE DNHLIFNKIL 150
    TGTFRVGVSI GLITKSISKL INIDEEIISH RLMGNFEPSI DSYEFLINKN 200
    INLQELNSKP FPFLLANTIE DKIFKHSIND FQFEWKYDGI RMQLIKRSGN 250
    VSLWTRGQEL VNESFPELVE KMSHIKDDFV LDGELLVWNF KEQIAFDFSF 300
    LQKRINRKSP TRSIQLKYPI IFIAYDLLEI NGRDIREIKL ENRRIELEKY 350
    FSKWQNKTEN DISDIFKICD LIFPKDWPDA LTYREKSREN NTEGLIIKKK 400
    TSIYSPGRKK GIWWKYKVDP MQLDAVLIYA KGGSGRRAGL YTDYSFALWK 450
    DQELIKFASA YSGLTNIEIK ELDKWIRNNT IEKFGPVRSL KPEMVFEISF 500
    EKIQISKRHK SGIAVRFPRI TKWRKDKKIN DADSLENAYA LMKKIS 546
    Length:546
    Mass (Da):64,038
    Last modified:December 6, 2005 - v1
    Checksum:i7DFBCDEFCA8D2362
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000111 Genomic DNA. Translation: ABB49793.1.
    RefSeqiYP_397229.1. NC_007577.1.

    Genome annotation databases

    EnsemblBacteriaiABB49793; ABB49793; PMT9312_0733.
    GeneIDi3765533.
    KEGGipmi:PMT9312_0733.
    PATRICi23005200. VBIProMar70153_0779.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000111 Genomic DNA. Translation: ABB49793.1 .
    RefSeqi YP_397229.1. NC_007577.1.

    3D structure databases

    ProteinModelPortali Q31BF2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 74546.PMT9312_0733.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABB49793 ; ABB49793 ; PMT9312_0733 .
    GeneIDi 3765533.
    KEGGi pmi:PMT9312_0733.
    PATRICi 23005200. VBIProMar70153_0779.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi NRHKSGV.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci PMAR74546:GHRG-753-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Prochlorococcus marinus str. MIT 9312."
      US DOE Joint Genome Institute
      Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Thiel J., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Richardson P.
      Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: MIT 9312Imported.

    Entry informationi

    Entry nameiQ31BF2_PROM9
    AccessioniPrimary (citable) accession number: Q31BF2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 6, 2005
    Last sequence update: December 6, 2005
    Last modified: October 1, 2014
    This is version 54 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3