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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

PMT9312_1155

Organism
Prochlorococcus marinus (strain MIT 9312)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPMAR74546:GHRG-1181-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:PMT9312_1155Imported
OrganismiProchlorococcus marinus (strain MIT 9312)Imported
Taxonomic identifieri74546 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus
ProteomesiUP000002715 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi74546.PMT9312_1155.

Structurei

3D structure databases

ProteinModelPortaliQ31A81.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG135930.
KOiK01971.
OMAiVERHECT.
OrthoDBiEOG65F8PX.

Family and domain databases

Gene3Di2.20.140.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
IPR008893. WGR_domain.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF05406. WGR. 1 hit.
[Graphical view]
SMARTiSM00773. WGR. 1 hit.
[Graphical view]
SUPFAMiSSF142921. SSF142921. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q31A81-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNEKISLSF TEGSSDKVYQ AELKEVDGGF NVTFQYGRRG KPLQSGTKTK
60 70 80 90 100
TPATYDDAKK IYDKLVLSKT SKGYAPEDSS VEYAETEKAG ESTDFKPQLL
110 120 130 140 150
NPINNENLEE LFNNFSRVYM QTKHDGERRG ASINNSEIIA SNRKGLRVGL
160 170 180 190 200
QKPIQDALEK LKDGGFIDTE IDSEDMGDHL VIFDVLKFKG LETKENSFSD
210 220 230 240 250
RVTYLEKLGE EIKSKKLDNA LKVDYPTIAD SLEKVKDFVE SAKSKNEEGV
260 270 280 290 300
VFKNGDATYN EGRPSSGGNA LKLKFVESAT LRVSSITEGK RSVSIEINDN
310 320 330 340 350
GIWISVGKCT VPANQDIPNP GELIEVDYLY AIKDGALFQP IYKGKRNDLD
360
ETAAVISQLK YKKD
Length:364
Mass (Da):40,522
Last modified:December 6, 2005 - v1
Checksum:i542FE984616C0C77
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000111 Genomic DNA. Translation: ABB50214.1.
RefSeqiWP_011376704.1. NC_007577.1.
YP_397650.1. NC_007577.1.

Genome annotation databases

EnsemblBacteriaiABB50214; ABB50214; PMT9312_1155.
KEGGipmi:PMT9312_1155.
PATRICi23006156. VBIProMar70153_1250.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000111 Genomic DNA. Translation: ABB50214.1.
RefSeqiWP_011376704.1. NC_007577.1.
YP_397650.1. NC_007577.1.

3D structure databases

ProteinModelPortaliQ31A81.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi74546.PMT9312_1155.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABB50214; ABB50214; PMT9312_1155.
KEGGipmi:PMT9312_1155.
PATRICi23006156. VBIProMar70153_1250.

Phylogenomic databases

eggNOGiNOG135930.
KOiK01971.
OMAiVERHECT.
OrthoDBiEOG65F8PX.

Enzyme and pathway databases

BioCyciPMAR74546:GHRG-1181-MONOMER.

Family and domain databases

Gene3Di2.20.140.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
IPR008893. WGR_domain.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF05406. WGR. 1 hit.
[Graphical view]
SMARTiSM00773. WGR. 1 hit.
[Graphical view]
SUPFAMiSSF142921. SSF142921. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Prochlorococcus marinus str. MIT 9312."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Thiel J., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Richardson P.
    Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MIT 9312Imported.

Entry informationi

Entry nameiQ31A81_PROM9
AccessioniPrimary (citable) accession number: Q31A81
Entry historyi
Integrated into UniProtKB/TrEMBL: December 6, 2005
Last sequence update: December 6, 2005
Last modified: May 27, 2015
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.