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Protein
Submitted name:

NADH dehydrogenase

Gene

ndhF

Organism
Baccharis neglecta (Roosevelt-weed)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Catalytic activityi

NAD(P)H + plastoquinone = NAD(P)+ + plastoquinol.SAAS annotation

GO - Molecular functioni

  1. NADH dehydrogenase (ubiquinone) activity Source: InterPro
  2. quinone binding Source: UniProtKB-KW

GO - Biological processi

  1. ATP synthesis coupled electron transport Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

NADUniRule annotation, NADPUniRule annotationSAAS annotation, PlastoquinoneUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
NADH dehydrogenaseImported
Gene namesi
Name:ndhFImported
Encoded oniPlastid; ChloroplastImported
OrganismiBaccharis neglecta (Roosevelt-weed)Imported
Taxonomic identifieri41488 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridscampanulidsAsteralesAsteraceaeAsteroideaeAstereaeSouth American lineagesBaccharis

Subcellular locationi

GO - Cellular componenti

  1. chloroplast Source: UniProtKB-KW
  2. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

ChloroplastImported, Membrane, Plastid

PTM / Processingi

Keywords - PTMi

QuinoneUniRule annotation

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSAAS annotation

Family and domain databases

InterProiIPR001750. NADH_UbQ/plastoQ_OxRdtase.
IPR001516. NADH_UbQ_OxRdtase_chain5/L_N.
IPR002128. NADH_UbQ_OxRdtase_chlpt_su5_C.
IPR003945. NADHpl_OxRdtase_5.
IPR018393. NADHpl_OxRdtase_5_subgr.
[Graphical view]
PfamiPF00361. Oxidored_q1. 1 hit.
PF01010. Oxidored_q1_C. 1 hit.
PF00662. Oxidored_q1_N. 1 hit.
[Graphical view]
PRINTSiPR01435. NPOXDRDTASE5.
TIGRFAMsiTIGR01974. NDH_I_L. 1 hit.

Sequencei

Sequence statusi: Complete.

Q31901-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MEQTYQYAWI IPFLPLPVPM LIGLGLLLFP TATKSLRRMW AFQSVLLLSI
60 70 80 90 100
VMIFSMNLSI QQINSSSVYQ YVWSWIINND FSLEFGYLID PLTSIMSILI
110 120 130 140 150
TTVGILVLIY SDNYMSHDHG YLRFFAYMSF FSTSMLGLVT SSNLIQIYIF
160 170 180 190 200
WELVGMCSYL LIGFWFTRPV AAKACQKAFV TNRVGDFGLL LGILGFYWVT
210 220 230 240 250
GSFEFRDLFQ IFNNLISNNE VNFLFVTLCA VLLFAGAIAK SAQFPLHVWL
260 270 280 290 300
PDAMEGPTPI SALIHAATMV AAGIFLVARL MPLFIVIPHI MNFISLIGII
310 320 330 340 350
TVFLGATLAL AQKDIKRGLA YSTMSQLGYM MLALGMGSYR SALFHLITHA
360 370 380 390 400
YSKALLFLGS GSVIHSMETL VGYCPKKSQN MVLMGGLTKH VPITKNSFLL
410 420 430 440 450
GTLSLCGIPP LACFWSKDEI LNDSWLYSPI FAIIAWSTAG LTAFYMCRIY
460 470 480 490 500
LLTFEGHLNV HFQNYSGKRN TPLYSISLWG KEGSKISNKN SCLLTLLKMN
510 520 530 540 550
KNGRPSFFSN RVYKIDENVR NTTPPFLSIP NFGNTKTSLY PYESDNTMLF
560 570 580 590 600
PILILIIFTL FVGFLGIPLN QDVDILTKWL TPSINLLHKN SDNSIDWYEF
610 620 630 640 650
CKDAFFSVSI ASFGIFIAFF LYKPVYSSFQ NLDLINSFFK MGPRRNFYDK
660 670 680 690 700
IKNAIYDWSY NRGYIDAFYG TFLIVGTRQF AEFTHFFDRR IIDGIPNGVG
710 720 730 740
LISFFVAEVI KSVGGGRISS YLFFYFSYVS IFLVIYYFLN L
Length:741
Mass (Da):84,085
Last modified:November 1, 1996 - v1
Checksum:i13D64E3166B1FDF2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L39448 Genomic DNA. Translation: AAC37730.1.
PIRiT12699.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L39448 Genomic DNA. Translation: AAC37730.1.
PIRiT12699.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR001750. NADH_UbQ/plastoQ_OxRdtase.
IPR001516. NADH_UbQ_OxRdtase_chain5/L_N.
IPR002128. NADH_UbQ_OxRdtase_chlpt_su5_C.
IPR003945. NADHpl_OxRdtase_5.
IPR018393. NADHpl_OxRdtase_5_subgr.
[Graphical view]
PfamiPF00361. Oxidored_q1. 1 hit.
PF01010. Oxidored_q1_C. 1 hit.
PF00662. Oxidored_q1_N. 1 hit.
[Graphical view]
PRINTSiPR01435. NPOXDRDTASE5.
TIGRFAMsiTIGR01974. NDH_I_L. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "ndhF sequence evolution and the major clades in the sunflower family."
    Kim K.J., Jansen R.K.
    Proc. Natl. Acad. Sci. U.S.A. 92:10379-10383(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ31901_BACNG
AccessioniPrimary (citable) accession number: Q31901
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: February 4, 2015
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.