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Q317W2

- Q317W2_PROM9

UniProt

Q317W2 - Q317W2_PROM9

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

PMT9312_1772

Organism
Prochlorococcus marinus (strain MIT 9312)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 60 (01 Oct 2014)
      Sequence version 1 (06 Dec 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciPMAR74546:GHRG-1818-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:PMT9312_1772Imported
    OrganismiProchlorococcus marinus (strain MIT 9312)Imported
    Taxonomic identifieri74546 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus
    ProteomesiUP000002715: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi74546.PMT9312_1772.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000233254.
    KOiK01971.
    OMAiVICEVIV.
    OrthoDBiEOG6GFGFV.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q317W2-1 [UniParc]FASTAAdd to Basket

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    MFKEEIIHQL ELHPSRLDKE KIISEAMENG LDDFFEGIRM ALDPLVTFGV    50
    KIVPEKENEK SQSFLWKDFR KLANKLIQRE LTGHAARDAI LAAMESATKE 100
    EWNGFYRRVL IKDLRCGVSE KTINKIAKKF PEYSIPIFSC PLAHDSANHE 150
    KKMIGKKQIE IKLDGVRVLT IIRQNKVEMF SRNGKQFHNF GHIISEIENV 200
    LKEDPAPYDL VLDGEVMSAN FQDLMKQVHR KDGKQSKDAV LHLFDLCPLE 250
    NFQKGRWNTN QTTRSLLVKE WVAKHSMLLK HIQTLEWENV DLDTIEGQKR 300
    FVELNKSAVE GGYEGVMIKD PDAMYECKRT HSWLKAKPFI EVTLKIVSVE 350
    EGTGRNKGRL GAVLVEGEDD GYEYSLSCGS GFSDIQRKEY WSKRHQLIGQ 400
    LVEIRADAKT KSKDAVAFSL RFPRFKCFRG FKAGEKV 437
    Length:437
    Mass (Da):50,294
    Last modified:December 6, 2005 - v1
    Checksum:i6C27787E66BA12D1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000111 Genomic DNA. Translation: ABB50833.1.
    RefSeqiWP_011377314.1. NC_007577.1.
    YP_398269.1. NC_007577.1.

    Genome annotation databases

    EnsemblBacteriaiABB50833; ABB50833; PMT9312_1772.
    GeneIDi3766598.
    KEGGipmi:PMT9312_1772.
    PATRICi23007580. VBIProMar70153_1946.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000111 Genomic DNA. Translation: ABB50833.1 .
    RefSeqi WP_011377314.1. NC_007577.1.
    YP_398269.1. NC_007577.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 74546.PMT9312_1772.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABB50833 ; ABB50833 ; PMT9312_1772 .
    GeneIDi 3766598.
    KEGGi pmi:PMT9312_1772.
    PATRICi 23007580. VBIProMar70153_1946.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000233254.
    KOi K01971.
    OMAi VICEVIV.
    OrthoDBi EOG6GFGFV.

    Enzyme and pathway databases

    BioCyci PMAR74546:GHRG-1818-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Prochlorococcus marinus str. MIT 9312."
      US DOE Joint Genome Institute
      Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Thiel J., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Richardson P.
      Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: MIT 9312Imported.

    Entry informationi

    Entry nameiQ317W2_PROM9
    AccessioniPrimary (citable) accession number: Q317W2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 6, 2005
    Last sequence update: December 6, 2005
    Last modified: October 1, 2014
    This is version 60 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3