Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q317W2

- Q317W2_PROM9

UniProt

Q317W2 - Q317W2_PROM9

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

PMT9312_1772

Organism
Prochlorococcus marinus (strain MIT 9312)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPMAR74546:GHRG-1818-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:PMT9312_1772Imported
OrganismiProchlorococcus marinus (strain MIT 9312)Imported
Taxonomic identifieri74546 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus
ProteomesiUP000002715: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi74546.PMT9312_1772.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000233254.
KOiK01971.
OMAiVICEVIV.
OrthoDBiEOG6GFGFV.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q317W2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MFKEEIIHQL ELHPSRLDKE KIISEAMENG LDDFFEGIRM ALDPLVTFGV
60 70 80 90 100
KIVPEKENEK SQSFLWKDFR KLANKLIQRE LTGHAARDAI LAAMESATKE
110 120 130 140 150
EWNGFYRRVL IKDLRCGVSE KTINKIAKKF PEYSIPIFSC PLAHDSANHE
160 170 180 190 200
KKMIGKKQIE IKLDGVRVLT IIRQNKVEMF SRNGKQFHNF GHIISEIENV
210 220 230 240 250
LKEDPAPYDL VLDGEVMSAN FQDLMKQVHR KDGKQSKDAV LHLFDLCPLE
260 270 280 290 300
NFQKGRWNTN QTTRSLLVKE WVAKHSMLLK HIQTLEWENV DLDTIEGQKR
310 320 330 340 350
FVELNKSAVE GGYEGVMIKD PDAMYECKRT HSWLKAKPFI EVTLKIVSVE
360 370 380 390 400
EGTGRNKGRL GAVLVEGEDD GYEYSLSCGS GFSDIQRKEY WSKRHQLIGQ
410 420 430
LVEIRADAKT KSKDAVAFSL RFPRFKCFRG FKAGEKV
Length:437
Mass (Da):50,294
Last modified:December 6, 2005 - v1
Checksum:i6C27787E66BA12D1
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000111 Genomic DNA. Translation: ABB50833.1.
RefSeqiYP_398269.1. NC_007577.1.

Genome annotation databases

EnsemblBacteriaiABB50833; ABB50833; PMT9312_1772.
GeneIDi3766598.
KEGGipmi:PMT9312_1772.
PATRICi23007580. VBIProMar70153_1946.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000111 Genomic DNA. Translation: ABB50833.1 .
RefSeqi YP_398269.1. NC_007577.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 74546.PMT9312_1772.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABB50833 ; ABB50833 ; PMT9312_1772 .
GeneIDi 3766598.
KEGGi pmi:PMT9312_1772.
PATRICi 23007580. VBIProMar70153_1946.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000233254.
KOi K01971.
OMAi VICEVIV.
OrthoDBi EOG6GFGFV.

Enzyme and pathway databases

BioCyci PMAR74546:GHRG-1818-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Prochlorococcus marinus str. MIT 9312."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Thiel J., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Richardson P.
    Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MIT 9312Imported.

Entry informationi

Entry nameiQ317W2_PROM9
AccessioniPrimary (citable) accession number: Q317W2
Entry historyi
Integrated into UniProtKB/TrEMBL: December 6, 2005
Last sequence update: December 6, 2005
Last modified: October 29, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3