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Q316J8 (Q316J8_DESAG) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length597 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABB37148.2
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2424 Potential EMBL ABB37148.2
Chain25 – 597573 Potential EMBL ABB37148.2
PRO_5000772844

Sequences

Sequence LengthMass (Da)Tools
Q316J8 [UniParc].

Last modified October 19, 2011. Version 2.
Checksum: A321582A73DAE915

FASTA59763,328
        10         20         30         40         50         60 
MSIKWKVLAV ALLGPLVVAL LMAVSWVRDI RHGAEEAILE KSRSIVLMAE ATRHQMAVKL 

        70         80         90        100        110        120 
KDGVVRPLDE LPSDKVVSAV PVVTAMRAAA ENAEKAGYEF RVPKVSPRNP ANTPTPLELE 

       130        140        150        160        170        180 
VLAKLKKEQL DEYVVREADA IRYFRPVRLT QDCMFCHGDP KGSKDPTGGI REGWKVGSIH 

       190        200        210        220        230        240 
GAFQVISSLE GVHARVRSAA IGVGITTVGV LLVLGLLARY FLGRSLLSPL ERLRAYAGAV 

       250        260        270        280        290        300 
AGGDLKARPE GKYEAELALL RDSIASMVGD LRDKMAESAA RTEEAAQQTQ RAEAAMGEAK 

       310        320        330        340        350        360 
EQEAKVSALL ESMARIASEA KEIAEQVSLA AQALSAQVDE VASGAGIQSA RSQETAVAME 

       370        380        390        400        410        420 
EMNATVLEVA RNSAESAATA DETRHKAAAG ENVVEQVVAS IARVNSRAQT LRGEMAGLGK 

       430        440        450        460        470        480 
QTEDISRIMD VISDIADQTN LLALNAAIEA ARAGDAGRGF AVVADEVRKL AEKTMHATKE 

       490        500        510        520        530        540 
VGDAIGTIQK SAHDNVEHVE NAAGAADEAT GKAREAGAAL KEIVRLAEHT SDQVRSIATA 

       550        560        570        580        590 
AEQQSATSEE INRAVDEISA VATDTAEGMD QAAGAVARLA ELAARLEELI DELNSRK 

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References

[1]"Complete genome sequence and updated annotation of Desulfovibrio alaskensis G20."
Hauser L.J., Land M.L., Brown S.D., Larimer F., Keller K.L., Rapp-Giles B.J., Price M.N., Lin M., Bruce D.C., Detter J.C., Tapia R., Han C.S., Goodwin L.A., Cheng J.F., Pitluck S., Copeland A., Lucas S., Nolan M. expand/collapse author list , Lapidus A.L., Palumbo A.V., Wall J.D.
J. Bacteriol. 193:4268-4269(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: G20 EMBL ABB37148.2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000112 Genomic DNA. Translation: ABB37148.2.
RefSeqYP_386843.2. NC_007519.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING207559.Dde_0347.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABB37148; ABB37148; Dde_0347.
GeneID3756357.
KEGGdde:Dde_0347.
PATRIC21739607. VBIDesDes50040_0344.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
KOK03406.

Enzyme and pathway databases

BioCycDALA207559:GH1L-289-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR021796. DUF3365.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF11845. DUF3365. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ316J8_DESAG
AccessionPrimary (citable) accession number: Q316J8
Entry history
Integrated into UniProtKB/TrEMBL: December 6, 2005
Last sequence update: October 19, 2011
Last modified: July 9, 2014
This is version 46 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)