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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

Dde_0369

Organism
Desulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans (strain G20))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciDALA207559:GH1L-310-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Dde_0369Imported
OrganismiDesulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans (strain G20))Imported
Taxonomic identifieri207559 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
Proteomesi
  • UP000002710 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei12 – 3423HelicalSequence analysisAdd
BLAST
Transmembranei186 – 21025HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi207559.Dde_0369.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini211 – 26454HAMPInterPro annotationAdd
BLAST
Domaini311 – 547237Methyl-accepting transducerInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili256 – 29338Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4107WTJ. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148080.

Family and domain databases

InterProiIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q316H6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNCFKTIKGK ITGIIVICIV SMLCILGLSV GTLAKLHGSF VSMKENTLDG
60 70 80 90 100
KVATTAINRD INYVSRLTRN IMLGSDADKD IDKLQKRIEA IEKNFVILEG
110 120 130 140 150
GAVGAEERQL VAKAKRAALA FVQDGLRFAT KMQSIPEGMR HLQYAEYGQS
160 170 180 190 200
ATPLAQQSRK YFGELTTIKD KAYDNEVYRF KDTIAFLKWC IIGVSAGIIV
210 220 230 240 250
LIVTLCLLLM RSIIRPLGEL TAYTGAVAAG DYSCSIDSTR FSGELGETAV
260 270 280 290 300
SVHTMVDSLR RSMTEAEEHS AQADEKAEQA RKATLEAEEE RTRITSLLNM
310 320 330 340 350
MHDLTSQVAA IVDELNVEAA GLESDSNEIA AGAQAQHARS QETATAMEEM
360 370 380 390 400
TATIAEVARN ASLAARNVTQ SKADAESGFA VVQQVITATN DVHVQTTRMQ
410 420 430 440 450
ETLGELSHRV EGIGDIMGVI TDIADQTNLL ALNAAIEAAR AGDAGRGFAV
460 470 480 490 500
VADEVRKLAE KTMQATREVG EAIKGIQAGA GANVESMNKV SEAVAHNNAL
510 520 530 540 550
TNEAGAALEA ITALVGESAV QVTSIATAAE QQSAACEEVN EATAAVNRIC
560 570 580
AQTSEGISRS VQRIRNIAAL TAELHGLTDK ISDGSAA
Length:587
Mass (Da):62,496
Last modified:October 19, 2011 - v2
Checksum:iD073F198D17E649D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000112 Genomic DNA. Translation: ABB37170.2.

Genome annotation databases

EnsemblBacteriaiABB37170; ABB37170; Dde_0369.
KEGGidde:Dde_0369.
PATRICi21739657. VBIDesDes50040_0369.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000112 Genomic DNA. Translation: ABB37170.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi207559.Dde_0369.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABB37170; ABB37170; Dde_0369.
KEGGidde:Dde_0369.
PATRICi21739657. VBIDesDes50040_0369.

Phylogenomic databases

eggNOGiENOG4107WTJ. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148080.

Enzyme and pathway databases

BioCyciDALA207559:GH1L-310-MONOMER.

Family and domain databases

InterProiIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: G20Imported.

Entry informationi

Entry nameiQ316H6_DESAG
AccessioniPrimary (citable) accession number: Q316H6
Entry historyi
Integrated into UniProtKB/TrEMBL: December 6, 2005
Last sequence update: October 19, 2011
Last modified: March 16, 2016
This is version 60 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.