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Q316B1 (Q316B1_DESAG) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length579 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABB37235.1
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: InterPro

signal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3434 Potential EMBL ABB37235.1
Chain35 – 579545 Potential EMBL ABB37235.1
PRO_5000102707

Sequences

Sequence LengthMass (Da)Tools
Q316B1 [UniParc].

Last modified December 6, 2005. Version 1.
Checksum: C7D8ED7DDEF60228

FASTA57961,941
        10         20         30         40         50         60 
MSFYTRMNTV LLAAGICIVL FPVCSWLILP VQAHTGTFIT VYGVLTLTGC GFIAAGLYQL 

        70         80         90        100        110        120 
HAGFSRPLEK LHAYTAALRD SPATVTPQLA GAAELHALAE EIHRTATALV QNADSYSPAA 

       130        140        150        160        170        180 
QAAGTLSEKF EQSTREAQAY RTDVEIMLSS LHKATQKAGD ISGELTGSLR TVTADIDHVT 

       190        200        210        220        230        240 
GGISVQNSKT QQIAIAMNEM NTAVLEVARN AASAASQAAR SQEKAQAGSR EVHKALELIT 

       250        260        270        280        290        300 
DVEENIGALK TTMDELGAQA ESIGVVLNVI NDIADQTNLL ALNAAIESAR AGEAGRGFAV 

       310        320        330        340        350        360 
VADEVRKLAE KTVSATKEVN EVVHGIRRVA RNSMDAVDEA AGKIGHSATA AADSERYMTD 

       370        380        390        400        410        420 
LIDIISQASY MVQNMAAASE EQSATSDQIN AAIAGIKDTA EETTAGMTRS AEALARITGL 

       430        440        450        460        470        480 
IAELESILAA LAKAETGKTV STGDGQFLNW TDDLSVNIGH LDSQHKNLVA LINELAAAMK 

       490        500        510        520        530        540 
AGKAKSVMLD TLGRLKEYTL THFKEEEDLF DRYDVPGARD HKKIHQSLRE KVLSVEQDIV 

       550        560        570 
SGRITVSLEL LEFLKEWILN HIQVVDKQYS AFLNSKGVR 

« Hide

References

[1]"Complete genome sequence and updated annotation of Desulfovibrio alaskensis G20."
Hauser L.J., Land M.L., Brown S.D., Larimer F., Keller K.L., Rapp-Giles B.J., Price M.N., Lin M., Bruce D.C., Detter J.C., Tapia R., Han C.S., Goodwin L.A., Cheng J.F., Pitluck S., Copeland A., Lucas S., Nolan M. expand/collapse author list , Lapidus A.L., Palumbo A.V., Wall J.D.
J. Bacteriol. 193:4268-4269(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: G20 EMBL ABB37235.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000112 Genomic DNA. Translation: ABB37235.1.
RefSeqYP_386930.1. NC_007519.1.

3D structure databases

ProteinModelPortalQ316B1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING207559.Dde_0434.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABB37235; ABB37235; Dde_0434.
GeneID3756288.
KEGGdde:Dde_0434.
PATRIC21739795. VBIDesDes50040_0438.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000078365.
KOK03406.
OMAMENIAQR.
OrthoDBEOG6VB6X8.

Enzyme and pathway databases

BioCycDALA207559:GH1L-369-MONOMER.

Family and domain databases

Gene3D1.20.120.50. 1 hit.
InterProIPR012827. Haemerythrin-like_metal-bd.
IPR012312. Haemerythrin/HHE_cat-bd_motif.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF01814. Hemerythrin. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM00283. MA. 1 hit.
[Graphical view]
SUPFAMSSF47188. SSF47188. 1 hit.
TIGRFAMsTIGR02481. hemeryth_dom. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ316B1_DESAG
AccessionPrimary (citable) accession number: Q316B1
Entry history
Integrated into UniProtKB/TrEMBL: December 6, 2005
Last sequence update: December 6, 2005
Last modified: July 9, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)