Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor

Gene

Dde_1322

Organism
Desulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans (strain G20))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciDALA207559:GH1L-1138-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensorImported
Gene namesi
Ordered Locus Names:Dde_1322Imported
OrganismiDesulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans (strain G20))Imported
Taxonomic identifieri207559 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
Proteomesi
  • UP000002710 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei16 – 3823HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi207559.Dde_1322.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini223 – 27553HAMPInterPro annotationAdd
BLAST
Domaini280 – 32041PAS (PER-ARNT-SIM)InterPro annotationAdd
BLAST
Domaini412 – 648237Methyl-accepting transducerInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG41080MQ. Bacteria.
ENOG410ZWSC. LUCA.
HOGENOMiHOG000086188.
OrthoDBiPOG091H0QRR.

Family and domain databases

InterProiIPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR000014. PAS.
IPR013656. PAS_4.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
PF08448. PAS_4. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q312M3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTIIPGQGM TIKVRLIAGL GVLVFLTVLL GGVGIFALEQ GKKDLSHLID
60 70 80 90 100
EQVELRDMAD AIRYGAAQHR RFEKDLFLNI GDRERQQRYL ARFREASAAL
110 120 130 140 150
GADIERLGRI VSASSAMSEH RRLPDVLKQA HADYVRAFES LAAETMDDPD
160 170 180 190 200
LTPQEANRRF GSAKEHIYLL ESTTDEIVRL VTHGLDSYIE LILSRNNTLR
210 220 230 240 250
LLMICLTVFV AAAGAGAARW LFRSVEVPLA AVIEHTEQVA DGRLDHRSTY
260 270 280 290 300
RFSGEMQTLF GAVERMVQSI KERILHNQAI INGVPDPIIV TDAGCMITSV
310 320 330 340 350
NAAALELLGK DEKTLAGQAL TSVLGRDFHG GESPVETIAR SGAAGHALTF
360 370 380 390 400
AHASGGQERY YHARAVKLAD GGGHVYGYME VLQDITSVKA GELNALRQSE
410 420 430 440 450
RLAGIARKAE GIAANVAEAS GILEEQVTEA ARGADQQQQR SSESATAMEE
460 470 480 490 500
MNATVREVAQ NASDTHLMTE DVRRKASHGA ELVDGVVRAV DGLERQSLEL
510 520 530 540 550
RTEMEQLGAK AADTGKVLGV ITDIADQTNL LALNAAIEAA RAGDAGRGFA
560 570 580 590 600
VVADEVRKLA EKTMQATGEV EQVIMGIQQY TARSVQATET AVRAVSESRG
610 620 630 640 650
LAGEAGRMLH EIVGAVHTAS DQVNSIATAA EEQAATSEEI NRIIMEVNEI
660 670 680
SDDTAQRMAE AEHAVRSLSG EAAALRALID SMHDET
Length:686
Mass (Da):73,978
Last modified:October 19, 2011 - v2
Checksum:iB6464E9DB89FF946
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000112 Genomic DNA. Translation: ABB38123.2.
RefSeqiWP_011367302.1. NC_007519.1.

Genome annotation databases

EnsemblBacteriaiABB38123; ABB38123; Dde_1322.
KEGGidde:Dde_1322.
PATRICi21741569. VBIDesDes50040_1309.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000112 Genomic DNA. Translation: ABB38123.2.
RefSeqiWP_011367302.1. NC_007519.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi207559.Dde_1322.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABB38123; ABB38123; Dde_1322.
KEGGidde:Dde_1322.
PATRICi21741569. VBIDesDes50040_1309.

Phylogenomic databases

eggNOGiENOG41080MQ. Bacteria.
ENOG410ZWSC. LUCA.
HOGENOMiHOG000086188.
OrthoDBiPOG091H0QRR.

Enzyme and pathway databases

BioCyciDALA207559:GH1L-1138-MONOMER.

Family and domain databases

InterProiIPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR000014. PAS.
IPR013656. PAS_4.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
PF08448. PAS_4. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ312M3_DESAG
AccessioniPrimary (citable) accession number: Q312M3
Entry historyi
Integrated into UniProtKB/TrEMBL: December 6, 2005
Last sequence update: October 19, 2011
Last modified: September 7, 2016
This is version 67 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.