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Protein

Arginine--tRNA ligase

Gene

argS

Organism
Desulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans (strain G20))
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionAminoacyl-tRNA synthetase, Ligase
Biological processProtein biosynthesis
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciDALA207559:G1G52-2152-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
Alternative name(s):
Arginyl-tRNA synthetaseUniRule annotation
Short name:
ArgRSUniRule annotation
Gene namesi
Name:argSUniRule annotation
Ordered Locus Names:Dde_2295
OrganismiDesulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans (strain G20))
Taxonomic identifieri207559 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
Proteomesi
  • UP000002710 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002420151 – 551Arginine--tRNA ligaseAdd BLAST551

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi207559.Dde_2295

Structurei

3D structure databases

ProteinModelPortaliQ30Z04
SMRiQ30Z04
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi125 – 135"HIGH" regionAdd BLAST11

Sequence similaritiesi

Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105C75 Bacteria
COG0018 LUCA
HOGENOMiHOG000247214
KOiK01887
OMAiNKPLHLG
OrthoDBiPOG091H01RF

Family and domain databases

CDDicd00671 ArgRS_core, 1 hit
Gene3Di3.30.1360.701 hit
3.40.50.6201 hit
HAMAPiMF_00123 Arg_tRNA_synth, 1 hit
InterProiView protein in InterPro
IPR001412 aa-tRNA-synth_I_CS
IPR001278 Arg-tRNA-ligase
IPR005148 Arg-tRNA-synth_N
IPR036695 Arg-tRNA-synth_N_sf
IPR035684 ArgRS_core
IPR008909 DALR_anticod-bd
IPR014729 Rossmann-like_a/b/a_fold
IPR009080 tRNAsynth_Ia_anticodon-bd
PANTHERiPTHR11956 PTHR11956, 1 hit
PfamiView protein in Pfam
PF03485 Arg_tRNA_synt_N, 1 hit
PF05746 DALR_1, 1 hit
PF00750 tRNA-synt_1d, 1 hit
PRINTSiPR01038 TRNASYNTHARG
SMARTiView protein in SMART
SM01016 Arg_tRNA_synt_N, 1 hit
SM00836 DALR_1, 1 hit
SUPFAMiSSF47323 SSF47323, 1 hit
SSF55190 SSF55190, 1 hit
TIGRFAMsiTIGR00456 argS, 1 hit
PROSITEiView protein in PROSITE
PS00178 AA_TRNA_LIGASE_I, 1 hit

Sequencei

Sequence statusi: Complete.

Q30Z04-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRAKNHLQTA LKAVVADLEL PWPDKVSIEP PKDKKFGDLA ANIALVLAKP
60 70 80 90 100
AAMPPRELAA RITERLQQKY PEISGVEIAG PGFINVTYAP DFWHRTVHMV
110 120 130 140 150
EQAGGRFGSV NVGNGRKVQI EYVSANPTGP LHIGHGRGAA IGDSLARMMR
160 170 180 190 200
FAGFETSTEY YINDAGRQML LLGASVYYRA KQIKGLDVAE PEEYYRGDYI
210 220 230 240 250
RDIASEVLGF TPDLLEKPEE EALAVCQKYA VDTIMAGIRQ DLADFSVSHD
260 270 280 290 300
VWFSEKSLVE TGAVDKTFDR LRRSGLAYEE DGALWFRTTD FGDDKNRVLK
310 320 330 340 350
KSNGYLTYFA SDIAYHDNKY DRGFDLCVDI WGADHHGYVP RMRAAVQALG
360 370 380 390 400
KPADSFDVIL VQLVNLLRNG EQVAMSTRAG EFETLADVVK EVGADAARFM
410 420 430 440 450
FLSRKSDSSL DFDLELVKQR SMDNPVYYVQ YAHARICSVL RKAAERGTTP
460 470 480 490 500
ETHSDEELLK PLVHADEIDM LRLVDRFEDT VEAAATSLSV HHISYYLQEL
510 520 530 540 550
ASALHRFYAN HPVLNAPDEQ ILKARLALLR AVAQVLRNGL DLLGVSAPEA

M
Length:551
Mass (Da):61,402
Last modified:December 6, 2005 - v1
Checksum:iBA03A553642103AD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000112 Genomic DNA Translation: ABB39092.1
RefSeqiWP_011368175.1, NC_007519.1

Genome annotation databases

EnsemblBacteriaiABB39092; ABB39092; Dde_2295
KEGGidde:Dde_2295

Similar proteinsi

Entry informationi

Entry nameiSYR_DESAG
AccessioniPrimary (citable) accession number: Q30Z04
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: December 6, 2005
Last modified: February 28, 2018
This is version 81 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome