Q30YW5 (Q30YW5_DESDG) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Succinyl-CoA synthetase, alpha/beta subunit (SucCD) EMBL ABB39131.1
EC=6.2.1.5 EMBL ABB39131.1

Gene names

Ordered Locus Names:

Dde_2334

Organism

Desulfovibrio desulfuricans (strain G20) [Complete proteome] [HAMAP]

Taxonomic identifier

207559 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Desulfovibrionales › Desulfovibrionaceae › Desulfovibrio › Desulfovibrio alaskensis

Protein attributes

Sequence length	700 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Ligand	Nucleotide-binding SAAS SAAS013650
Molecular function	Ligase EMBL ABB39131.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro cofactor binding Inferred from electronic annotation. Source: InterPro succinate-CoA ligase (ADP-forming) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q30YW5 [UniParc]. Last modified December 6, 2005. Version 1. Checksum: 04ECD9FE275EB624	FASTA	700	75,262
	10 20 30 40 50 60 MFLNEHMSKV LFAEAGIDTP AGDLLTPGQL AEYTPAVSAP WFLKAQVLTG GRGKAGGIRR 70 80 90 100 110 120 AATLKELRET AQDMFTMEIK GHRVPFLRIE SATDIRRECY LSFVLSRERR DLLLTTSRAG 130 140 150 160 170 180 GIHVESSTGQ QKPLVQRVPL DSGLREHHLR AAFFEMGVEK EHWAGFKAMA EKLYRAVREY 190 200 210 220 230 240 GLLLAEINPL VLTCDGRWVA LDGKVELDDS VVDLQPDLER FYTPEHHSRE ENLAREAGLS 250 260 270 280 290 300 YVELKGWVGI LVNGAGLAMA TMDLLNFSGL SAANFMDLGG AADASRMRRA LDLLFENRNV 310 320 330 340 350 360 RAVFINLFGG IVSCADVARA LVDALEGGDA PKPIVVRMAG HESAEGRALL HDFAHPSVTI 370 380 390 400 410 420 AQEMHEALDA LRSMKPADVP RIEFPLPQEP DPVPQHNGQE AAACVPVYNG MGLDSSSGVL 430 440 450 460 470 480 VQGLTGRVAQ RHAALMMEYG TRVVAGVTPF KGGQEVMGIP VYDSVHEACR HHRIDASIIF 490 500 510 520 530 540 VPAAFAPDAV LEAAAEEIPW VVCITEGIPQ AAMLSALKNI QPSPTCVVGP NTPGIVVPHQ 550 560 570 580 590 600 LKIGIMPGYV FSPGPVAVFS RSGTLTYEAA SRLSAAGIGQ SVCVGVGGDS FVGTGFVDLC 610 620 630 640 650 660 ERVRHDAATR AVLVLGEVGG RAEEELAEYV RRTGFSKPVV SFVAARTAPP GRRLGHAGAI 670 680 690 700 LDETTGGVEA KLQAMREAGF TICPDLASLP RIMRAVLDRA

References

[1]

"Complete genome sequence and updated annotation of Desulfovibrio alaskensis G20." Hauser L.J., Land M.L., Brown S.D., Larimer F., Keller K.L., Rapp-Giles B.J., Price M.N., Lin M., Bruce D.C., Detter J.C., Tapia R., Han C.S., Goodwin L.A., Cheng J.F., Pitluck S., Copeland A., Lucas S., Nolan M. , Lapidus A.L., Palumbo A.V., Wall J.D. J. Bacteriol. 193:4268-4269(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: G20.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000112 Genomic DNA. Translation: ABB39131.1.
RefSeq	YP_388826.1. NC_007519.1.
3D structure databases
ProteinModelPortal	Q30YW5.
ModBase	Search...
Protein-protein interaction databases
STRING	207559.Dde_2334.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABB39131; ABB39131; Dde_2334.
GeneID	3757345.
KEGG	dde:Dde_2334.
PATRIC	21743601. VBIDesDes50040_2308.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0045.
HOGENOM	HOG000227941.
KO	K01902.
OMA	DSVHEAC.
ProtClustDB	CLSK705610.
Enzyme and pathway databases
BioCyc	DALA207559:GH1L-2088-MONOMER.
Family and domain databases
Gene3D	3.30.1490.20. 1 hit. 3.30.470.20. 1 hit. 3.40.50.261. 2 hits. 3.40.50.720. 1 hit.
InterPro	IPR013650. ATP-grasp_succ-CoA_synth-type. IPR013815. ATP_grasp_subdomain_1. IPR013816. ATP_grasp_subdomain_2. IPR003781. CoA-bd. IPR005810. CoA_lig_alpha. IPR005811. CoA_ligase. IPR016040. NAD(P)-bd_dom. IPR016102. Succinyl-CoA_synth-like. [Graphical view]
Pfam	PF08442. ATP-grasp_2. 1 hit. PF02629. CoA_binding. 1 hit. PF00549. Ligase_CoA. 2 hits. [Graphical view]
PRINTS	PR01798. SCOASYNTHASE.
SMART	SM00881. CoA_binding. 1 hit. [Graphical view]
SUPFAM	SSF52210. CoA_ligase. 2 hits.
PROSITE	PS01216. SUCCINYL_COA_LIG_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q30YW5_DESDG

Accession

Primary (citable) accession number: Q30YW5

Entry history

Integrated into UniProtKB/TrEMBL:	December 6, 2005
Last sequence update:	December 6, 2005
Last modified:	May 1, 2013
This is version 62 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)