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Q30WW0

- Q30WW0_DESAG

UniProt

Q30WW0 - Q30WW0_DESAG

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Protein
Submitted name:

D-alanine--D-alanine ligase

Gene

Dde_3042

Organism
Desulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans (strain G20))
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi

Functioni

Cell wall formation.SAAS annotation

Catalytic activityi

ATP + 2 D-alanine = ADP + phosphate + D-alanyl-D-alanine.SAAS annotation

Cofactori

Binds 2 magnesium or manganese ions per subunit.SAAS annotation

Pathwayi

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. D-alanine-D-alanine ligase activity Source: UniProtKB-EC
  3. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. cell wall organization Source: UniProtKB-KW
  2. peptidoglycan biosynthetic process Source: UniProtKB-UniPathway
  3. regulation of cell shape Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseSAAS annotationImported

Keywords - Biological processi

Cell shape, Cell wall biogenesis/degradationSAAS annotation, Peptidoglycan synthesisSAAS annotation

Keywords - Ligandi

ATP-bindingSAAS annotation, MagnesiumSAAS annotation, ManganeseSAAS annotation, Metal-bindingSAAS annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciDALA207559:GH1L-2715-MONOMER.
UniPathwayiUPA00219.

Names & Taxonomyi

Protein namesi
Submitted name:
D-alanine--D-alanine ligaseImported (EC:6.3.2.4Imported)
Gene namesi
Ordered Locus Names:Dde_3042Imported
OrganismiDesulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans (strain G20))Imported
Taxonomic identifieri207559 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
ProteomesiUP000002710: Chromosome

Subcellular locationi

Cytoplasm SAAS annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi207559.Dde_3042.

Structurei

3D structure databases

ProteinModelPortaliQ30WW0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains ATP-grasp domain.SAAS annotation

Phylogenomic databases

eggNOGiCOG1181.
HOGENOMiHOG000011592.
KOiK01921.
OMAiEIYFLEV.
OrthoDBiEOG66MQKK.

Family and domain databases

Gene3Di3.30.1490.20. 1 hit.
3.30.470.20. 1 hit.
InterProiIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR016185. PreATP-grasp_dom.
[Graphical view]
PANTHERiPTHR23132. PTHR23132. 1 hit.
PfamiPF07478. Dala_Dala_lig_C. 1 hit.
[Graphical view]
SUPFAMiSSF52440. SSF52440. 1 hit.
PROSITEiPS50975. ATP_GRASP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q30WW0 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLVGITYDLK EEYLARGYSE EEAAEFDSPA TIEGIETALQ ALGYETQRIG
60 70 80 90 100
ALPALAAALL QGRRWDIVFN IAEGCHGFGR ESQVPALLDY YSVPYVFSDP
110 120 130 140 150
MTLGICLHKG MTKHIVRDNG IPTADFVVIS DPAEAAAVSL PYPLFVKPVA
160 170 180 190 200
EGTGIGVGAA SKVQNPQELA AACARLIDRH RQPVLVETFL CGRELTVGIT
210 220 230 240 250
GTGAGARTLG ALEVVFAPAA ESDVYGYVNK AEYLERVQYH LADDADAQKA
260 270 280 290 300
RHVALAAWRA LGCRDGGRVD LRFDARGVPN FIEVNPLAGL NPVNSDLPIM
310 320 330 340
CYKAGLRYEQ LIGQIMESAV ERLKTDTGQR FVPAVTAAAY TGHTGTVAE
Length:349
Mass (Da):37,500
Last modified:December 6, 2005 - v1
Checksum:i19B104561BAB9FE6
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000112 Genomic DNA. Translation: ABB39836.1.
RefSeqiYP_389531.1. NC_007519.1.

Genome annotation databases

EnsemblBacteriaiABB39836; ABB39836; Dde_3042.
GeneIDi3758035.
KEGGidde:Dde_3042.
PATRICi21744975. VBIDesDes50040_2974.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000112 Genomic DNA. Translation: ABB39836.1 .
RefSeqi YP_389531.1. NC_007519.1.

3D structure databases

ProteinModelPortali Q30WW0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 207559.Dde_3042.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABB39836 ; ABB39836 ; Dde_3042 .
GeneIDi 3758035.
KEGGi dde:Dde_3042.
PATRICi 21744975. VBIDesDes50040_2974.

Phylogenomic databases

eggNOGi COG1181.
HOGENOMi HOG000011592.
KOi K01921.
OMAi EIYFLEV.
OrthoDBi EOG66MQKK.

Enzyme and pathway databases

UniPathwayi UPA00219 .
BioCyci DALA207559:GH1L-2715-MONOMER.

Family and domain databases

Gene3Di 3.30.1490.20. 1 hit.
3.30.470.20. 1 hit.
InterProi IPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR016185. PreATP-grasp_dom.
[Graphical view ]
PANTHERi PTHR23132. PTHR23132. 1 hit.
Pfami PF07478. Dala_Dala_lig_C. 1 hit.
[Graphical view ]
SUPFAMi SSF52440. SSF52440. 1 hit.
PROSITEi PS50975. ATP_GRASP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: G20Imported.

Entry informationi

Entry nameiQ30WW0_DESAG
AccessioniPrimary (citable) accession number: Q30WW0
Entry historyi
Integrated into UniProtKB/TrEMBL: December 6, 2005
Last sequence update: December 6, 2005
Last modified: October 29, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3