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Q30WW0 (Q30WW0_DESDG) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
D-alanine--D-alanine ligase EMBL ABB39836.1
EC=6.3.2.4 EMBL ABB39836.1
Gene names
Ordered Locus Names:Dde_3042
OrganismDesulfovibrio desulfuricans (strain G20) [Complete proteome] [HAMAP]
Taxonomic identifier207559 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Deltaproteobacteria › Desulfovibrionales › Desulfovibrionaceae › Desulfovibrio ›

Protein attributes

Sequence length349 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Cell wall formation By similarity. SAAS SAAS005905

Catalytic activity

ATP + 2 D-alanine = ADP + phosphate + D-alanyl-D-alanine. SAAS SAAS005905

Cofactor

Binds 2 magnesium or manganese ions per subunit By similarity. SAAS SAAS005905

Pathway

Cell wall biogenesis; peptidoglycan biosynthesis. SAAS SAAS005905

Subcellular location

Cytoplasm By similarity SAAS SAAS005905.

Sequence similarities

Contains 1 ATP-grasp domain. SAAS SAAS005905

Sequences

Sequence LengthMass (Da)Tools
Q30WW0 [UniParc].

Last modified December 6, 2005. Version 1.
Checksum: 19B104561BAB9FE6

FASTA34937,500
        10         20         30         40         50         60 
MLVGITYDLK EEYLARGYSE EEAAEFDSPA TIEGIETALQ ALGYETQRIG ALPALAAALL 

        70         80         90        100        110        120 
QGRRWDIVFN IAEGCHGFGR ESQVPALLDY YSVPYVFSDP MTLGICLHKG MTKHIVRDNG 

       130        140        150        160        170        180 
IPTADFVVIS DPAEAAAVSL PYPLFVKPVA EGTGIGVGAA SKVQNPQELA AACARLIDRH 

       190        200        210        220        230        240 
RQPVLVETFL CGRELTVGIT GTGAGARTLG ALEVVFAPAA ESDVYGYVNK AEYLERVQYH 

       250        260        270        280        290        300 
LADDADAQKA RHVALAAWRA LGCRDGGRVD LRFDARGVPN FIEVNPLAGL NPVNSDLPIM 

       310        320        330        340 
CYKAGLRYEQ LIGQIMESAV ERLKTDTGQR FVPAVTAAAY TGHTGTVAE

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References

[1]"Complete genome sequence and updated annotation of Desulfovibrio alaskensis G20."
Hauser L.J., Land M.L., Brown S.D., Larimer F., Keller K.L., Rapp-Giles B.J., Price M.N., Lin M., Bruce D.C., Detter J.C., Tapia R., Han C.S., Goodwin L.A., Cheng J.F., Pitluck S., Copeland A., Lucas S., Nolan M. expand/collapse author list , Lapidus A.L., Palumbo A.V., Wall J.D.
J. Bacteriol. 193:4268-4269(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: G20.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000112 Genomic DNA. Translation: ABB39836.1.
RefSeqYP_389531.1. NC_007519.1.

3D structure databases

ProteinModelPortalQ30WW0.
ModBaseSearch...

Protein-protein interaction databases

STRING207559.Dde_3042.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABB39836; ABB39836; Dde_3042.
GeneID3758035.
KEGGdde:Dde_3042.
PATRIC21744975. VBIDesDes50040_2974.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1181.
HOGENOMHOG000011592.
KOK01921.
OMAQMVEYEV.
ProtClustDBCLSK942515.

Enzyme and pathway databases

BioCycDALA207559:GH1L-2715-MONOMER.
UniPathwayUPA00219.

Family and domain databases

Gene3D3.30.1490.20. 1 hit.
3.30.470.20. 1 hit.
InterProIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR016185. PreATP-grasp_dom.
[Graphical view]
PANTHERPTHR23132. PTHR23132. 1 hit.
PfamPF07478. Dala_Dala_lig_C. 1 hit.
[Graphical view]
SUPFAMSSF52440. PreATP-grasp-like. 1 hit.
PROSITEPS50975. ATP_GRASP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ30WW0_DESDG
AccessionPrimary (citable) accession number: Q30WW0
Entry history
Integrated into UniProtKB/TrEMBL: December 6, 2005
Last sequence update: December 6, 2005
Last modified: May 1, 2013
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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