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Q30WS8 (Q30WS8_DESDG) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor EMBL ABB39868.1
Gene names
Ordered Locus Names:Dde_3074 EMBL ABB39868.1
OrganismDesulfovibrio desulfuricans (strain G20) [Complete proteome] [HAMAP] EMBL ABB39868.1
Taxonomic identifier207559 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Deltaproteobacteria › Desulfovibrionales › Desulfovibrionaceae › Desulfovibrio ›

Protein attributes

Sequence length529 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABB39868.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processsignal transduction by phosphorylation

Inferred from electronic annotation. Source: GOC

   Cellular_componentintegral to membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionphosphorelay sensor kinase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2727 Potential EMBL ABB39868.1
Chain28 – 529502 Potential EMBL ABB39868.1
PRO_5000103057

Sequences

Sequence LengthMass (Da)Tools
Q30WS8 [UniParc].

Last modified December 6, 2005. Version 1.
Checksum: 5282018C5EDB396A

FASTA52955,992
        10         20         30         40         50         60 
MFSKISVKAL ALLTAAAGLA VPLCVAGWQY ASAPSGDVRS LLLWGAVSTV AAYCLVVVPL 

        70         80         90        100        110        120 
AVVLVRKVTR PVAEIQQRVE KILDGDYSVC FACDGGDELA EMRLALDSLL SRLKYNLGFA 

       130        140        150        160        170        180 
QGVLKGIDTP FVVVDNDEVL TYTNPSLISL LEQTGKPEDH YGQNVALFFY GDASRRTVLR 

       190        200        210        220        230        240 
DSLEHHTVTS REVDLTTRKG NTRRIQIHAS PLFDLSGGLM GALCIYQDLT DLRAREAEIV 

       250        260        270        280        290        300 
SKNESIAAAV KSSETVSLTV SEIAGSVDQL IMQSARDAET QTERTVESAS AMEQMNVAVL 

       310        320        330        340        350        360 
DVARSASAAA EQAGIACDKA RQGAGVVEEA MNAIDEVARL AEGLKVSMGD LGRQAEGIGQ 

       370        380        390        400        410        420 
VMTVISDIAD QTNLLALNAA IEAARAGDAG RGFAVVADEV RKLAEKTMQA TSEVGAAITS 

       430        440        450        460        470        480 
IQAGTRNNVQ NVEASVLAVQ RSRELSSASG DSLREIVDLV IRTTDQVQAI ATASEEQSST 

       490        500        510        520 
SEHISQAVDE VRIISENSAR SLAEAAGMVH KLSAKAGELQ RIISTVASS

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References

[1]"Complete genome sequence and updated annotation of Desulfovibrio alaskensis G20."
Hauser L.J., Land M.L., Brown S.D., Larimer F., Keller K.L., Rapp-Giles B.J., Price M.N., Lin M., Bruce D.C., Detter J.C., Tapia R., Han C.S., Goodwin L.A., Cheng J.F., Pitluck S., Copeland A., Lucas S., Nolan M. expand/collapse author list , Lapidus A.L., Palumbo A.V., Wall J.D.
J. Bacteriol. 193:4268-4269(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: G20 EMBL ABB39868.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000112 Genomic DNA. Translation: ABB39868.1.
RefSeqYP_389563.1. NC_007519.1.

3D structure databases

ProteinModelPortalQ30WS8.
ModBaseSearch...

Protein-protein interaction databases

STRING207559.Dde_3074.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABB39868; ABB39868; Dde_3074.
GeneID3758068.
KEGGdde:Dde_3074.
PATRIC21745039. VBIDesDes50040_3005.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG289607.
HOGENOMHOG000227631.
KOK03406.
OMADIAQTHA.
ProtClustDBCLSK704775.

Enzyme and pathway databases

BioCycDALA207559:GH1L-2740-MONOMER.

Family and domain databases

InterProIPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
[Graphical view]
SUPFAMSSF55785. SSF55785. 1 hit.
TIGRFAMsTIGR00229. sensory_box. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50113. PAC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ30WS8_DESDG
AccessionPrimary (citable) accession number: Q30WS8
Entry history
Integrated into UniProtKB/TrEMBL: December 6, 2005
Last sequence update: December 6, 2005
Last modified: May 29, 2013
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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