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Protein

Probable chemoreceptor glutamine deamidase CheD

Gene

cheD

Organism
Desulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans (strain G20))
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis.UniRule annotation

Catalytic activityi

Protein L-glutamine + H2O = protein L-glutamate + NH3.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Chemotaxis

Enzyme and pathway databases

BioCyciDALA207559:GH1L-2867-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable chemoreceptor glutamine deamidase CheDUniRule annotation (EC:3.5.1.44UniRule annotation)
Gene namesi
Name:cheDUniRule annotation
Ordered Locus Names:Dde_3212
OrganismiDesulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans (strain G20))
Taxonomic identifieri207559 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
ProteomesiUP000002710 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 212212Probable chemoreceptor glutamine deamidase CheDPRO_0000251030Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi207559.Dde_3212.

Structurei

3D structure databases

ProteinModelPortaliQ30WE0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the CheD family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1871.
HOGENOMiHOG000273194.
KOiK03411.
OrthoDBiEOG6WHNQB.

Family and domain databases

HAMAPiMF_01440. CheD.
InterProiIPR005659. Chemorcpt_Glu_NH3ase_CheD.
IPR011324. Cytotoxic_necrot_fac-like_cat.
[Graphical view]
PfamiPF03975. CheD. 1 hit.
[Graphical view]
SUPFAMiSSF64438. SSF64438. 1 hit.

Sequencei

Sequence statusi: Complete.

Q30WE0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGYSAEQRA AMQCMSLARH GLPHALADCG LPHVHLKIGE GIVTRRALLI
60 70 80 90 100
STVLGSCVSV TFFSRRLQLA GIFHAMLPVI TQSYRPCNEP CRFVDSAIEA
110 120 130 140 150
VYGNFEKRGL HPEEVEVKLF GGAFSMGLRE EHPDRCMIDV GGRNVLTARE
160 170 180 190 200
VLAAKGLEIR SEQVQGTRGR KLLFNTRTGE VWVKLLNNAA NQLARRQEEQ
210
ARAQSARGCS LD
Length:212
Mass (Da):23,402
Last modified:December 6, 2005 - v1
Checksum:i64AD0491E0E9B0CE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000112 Genomic DNA. Translation: ABB40006.1.
RefSeqiWP_011368957.1. NC_007519.1.
YP_389701.1. NC_007519.1.

Genome annotation databases

EnsemblBacteriaiABB40006; ABB40006; Dde_3212.
KEGGidde:Dde_3212.
PATRICi21745321. VBIDesDes50040_3145.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000112 Genomic DNA. Translation: ABB40006.1.
RefSeqiWP_011368957.1. NC_007519.1.
YP_389701.1. NC_007519.1.

3D structure databases

ProteinModelPortaliQ30WE0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi207559.Dde_3212.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABB40006; ABB40006; Dde_3212.
KEGGidde:Dde_3212.
PATRICi21745321. VBIDesDes50040_3145.

Phylogenomic databases

eggNOGiCOG1871.
HOGENOMiHOG000273194.
KOiK03411.
OrthoDBiEOG6WHNQB.

Enzyme and pathway databases

BioCyciDALA207559:GH1L-2867-MONOMER.

Family and domain databases

HAMAPiMF_01440. CheD.
InterProiIPR005659. Chemorcpt_Glu_NH3ase_CheD.
IPR011324. Cytotoxic_necrot_fac-like_cat.
[Graphical view]
PfamiPF03975. CheD. 1 hit.
[Graphical view]
SUPFAMiSSF64438. SSF64438. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: G20.

Entry informationi

Entry nameiCHED_DESAG
AccessioniPrimary (citable) accession number: Q30WE0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 3, 2006
Last sequence update: December 6, 2005
Last modified: May 27, 2015
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.