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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer with Cache sensor

Gene

Dde_3246

Organism
Desulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans (strain G20))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciDALA207559:GH1L-2884-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducer with Cache sensorImported
Gene namesi
Ordered Locus Names:Dde_3246Imported
OrganismiDesulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans (strain G20))Imported
Taxonomic identifieri207559 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
Proteomesi
  • UP000002710 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei212 – 232HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi207559.Dde_3246.

Structurei

3D structure databases

ProteinModelPortaliQ30WA6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini229 – 281HAMPInterPro annotationAdd BLAST53
Domaini329 – 565Methyl-accepting transducerInterPro annotationAdd BLAST237

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili273 – 317Sequence analysisAdd BLAST45

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4107SD1. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148079.
KOiK03406.
OMAiHVMNVIN.
OrthoDBiPOG091H0QRR.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR033480. sCache_2.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF17200. sCache_2. 1 hit.
[Graphical view]
SMARTiSM01049. Cache_2. 1 hit.
SM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q30WA6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRKYSIGTR VIALVALLVL CIVGIISASL KMQDSVVAYN IKETEAVMLR
60 70 80 90 100
GERTKLKVAT DSIATTIGDI LSDSASKEEQ LEFIRTAVEN VRFEDDKSGY
110 120 130 140 150
FFVYEGTTVV ALPIKKSVIG QDLSSVTDSD GVRYVHELSK AAGSGGGFVR
160 170 180 190 200
YVFDKPGQGL QPKLAYARPI SGTPYWIGTG VYIDNIDAER ERLETATGDM
210 220 230 240 250
VSSAVYTLTG SIAAALILLV LPVCALIIVS IVRPIRSATE AAHQIAQGNL
260 270 280 290 300
DITLDDSGKD EVARLQSSLN SMVRELVATI ETVKQKEAEA NRQAEAAHQA
310 320 330 340 350
TEQTKEAMAR AEAATRDGMN AAAQRLEGVV AAITAATGDL DTRSNEISHG
360 370 380 390 400
TDMQMARINE TATAMEEMNA TVMEVARNAA EAAEQTDLSR IKAQEGAEAV
410 420 430 440 450
SATINAMNDL KALADGLKEN MHRLGDQSQS IGHVMSVIND IADQTNLLAL
460 470 480 490 500
NAAIEAARAG DAGRGFAVVA DEVRKLAEKT MNATKEVGDS IVAIQQLAKT
510 520 530 540 550
NVDGMTEASQ AIDKAVARSA SSGEMLSEIV RLAQDAAGQV QSIATAAEEQ
560 570 580 590 600
SAASEEIARS VEEVNTLAQD NGRMIAESVQ DIGQLAEQAV TLRSLVDELK

K
Length:601
Mass (Da):63,905
Last modified:December 6, 2005 - v1
Checksum:iE17E0D5CB4693C1E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000112 Genomic DNA. Translation: ABB40040.1.
RefSeqiWP_011368989.1. NC_007519.1.

Genome annotation databases

EnsemblBacteriaiABB40040; ABB40040; Dde_3246.
KEGGidde:Dde_3246.
PATRICi21745387. VBIDesDes50040_3178.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000112 Genomic DNA. Translation: ABB40040.1.
RefSeqiWP_011368989.1. NC_007519.1.

3D structure databases

ProteinModelPortaliQ30WA6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi207559.Dde_3246.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABB40040; ABB40040; Dde_3246.
KEGGidde:Dde_3246.
PATRICi21745387. VBIDesDes50040_3178.

Phylogenomic databases

eggNOGiENOG4107SD1. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148079.
KOiK03406.
OMAiHVMNVIN.
OrthoDBiPOG091H0QRR.

Enzyme and pathway databases

BioCyciDALA207559:GH1L-2884-MONOMER.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR033480. sCache_2.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF17200. sCache_2. 1 hit.
[Graphical view]
SMARTiSM01049. Cache_2. 1 hit.
SM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ30WA6_DESAG
AccessioniPrimary (citable) accession number: Q30WA6
Entry historyi
Integrated into UniProtKB/TrEMBL: December 6, 2005
Last sequence update: December 6, 2005
Last modified: November 2, 2016
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.