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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer with Cache sensor

Gene

Dde_3246

Organism
Desulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans (strain G20))
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionTransducerPROSITE-ProRule annotation

Enzyme and pathway databases

BioCyciDALA207559:G1G52-3043-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducer with Cache sensorImported
Gene namesi
Ordered Locus Names:Dde_3246Imported
OrganismiDesulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans (strain G20))Imported
Taxonomic identifieri207559 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
Proteomesi
  • UP000002710 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei212 – 232HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi207559.Dde_3246

Structurei

3D structure databases

ProteinModelPortaliQ30WA6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini229 – 281HAMPInterPro annotationAdd BLAST53
Domaini329 – 565Methyl-accepting transducerInterPro annotationAdd BLAST237

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili273 – 317Sequence analysisAdd BLAST45
Coiled coili365 – 385Sequence analysisAdd BLAST21
Coiled coili407 – 427Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4107SD1 Bacteria
COG0840 LUCA
HOGENOMiHOG000148079
KOiK03406
OMAiNFSYYYQ
OrthoDBiPOG091H0QRR

Family and domain databases

CDDicd06225 HAMP, 1 hit
InterProiView protein in InterPro
IPR003660 HAMP_dom
IPR004089 MCPsignal_dom
IPR033480 sCache_2
PfamiView protein in Pfam
PF00672 HAMP, 1 hit
PF00015 MCPsignal, 1 hit
PF17200 sCache_2, 1 hit
SMARTiView protein in SMART
SM01049 Cache_2, 1 hit
SM00304 HAMP, 1 hit
SM00283 MA, 1 hit
PROSITEiView protein in PROSITE
PS50111 CHEMOTAXIS_TRANSDUC_2, 1 hit
PS50885 HAMP, 1 hit

Sequencei

Sequence statusi: Complete.

Q30WA6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRKYSIGTR VIALVALLVL CIVGIISASL KMQDSVVAYN IKETEAVMLR
60 70 80 90 100
GERTKLKVAT DSIATTIGDI LSDSASKEEQ LEFIRTAVEN VRFEDDKSGY
110 120 130 140 150
FFVYEGTTVV ALPIKKSVIG QDLSSVTDSD GVRYVHELSK AAGSGGGFVR
160 170 180 190 200
YVFDKPGQGL QPKLAYARPI SGTPYWIGTG VYIDNIDAER ERLETATGDM
210 220 230 240 250
VSSAVYTLTG SIAAALILLV LPVCALIIVS IVRPIRSATE AAHQIAQGNL
260 270 280 290 300
DITLDDSGKD EVARLQSSLN SMVRELVATI ETVKQKEAEA NRQAEAAHQA
310 320 330 340 350
TEQTKEAMAR AEAATRDGMN AAAQRLEGVV AAITAATGDL DTRSNEISHG
360 370 380 390 400
TDMQMARINE TATAMEEMNA TVMEVARNAA EAAEQTDLSR IKAQEGAEAV
410 420 430 440 450
SATINAMNDL KALADGLKEN MHRLGDQSQS IGHVMSVIND IADQTNLLAL
460 470 480 490 500
NAAIEAARAG DAGRGFAVVA DEVRKLAEKT MNATKEVGDS IVAIQQLAKT
510 520 530 540 550
NVDGMTEASQ AIDKAVARSA SSGEMLSEIV RLAQDAAGQV QSIATAAEEQ
560 570 580 590 600
SAASEEIARS VEEVNTLAQD NGRMIAESVQ DIGQLAEQAV TLRSLVDELK

K
Length:601
Mass (Da):63,905
Last modified:December 6, 2005 - v1
Checksum:iE17E0D5CB4693C1E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000112 Genomic DNA Translation: ABB40040.1
RefSeqiWP_011368989.1, NC_007519.1

Genome annotation databases

EnsemblBacteriaiABB40040; ABB40040; Dde_3246
KEGGidde:Dde_3246

Entry informationi

Entry nameiQ30WA6_DESAG
AccessioniPrimary (citable) accession number: Q30WA6
Entry historyiIntegrated into UniProtKB/TrEMBL: December 6, 2005
Last sequence update: December 6, 2005
Last modified: February 28, 2018
This is version 79 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported