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Q30265 (Q30265_BOVIN) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 82. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:BoLA-DRA EMBL BAA07172.1
OrganismBos taurus (Bovine) EMBL BAA07172.1
Taxonomic identifier9913 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos

Protein attributes

Sequence length238 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the MHC class II family. RuleBase RU004238

Contains Ig-like C1-type (immunoglobulin-like) domain. SAAS SAAS014745

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain‹1 – 238›238BoLa-DR-alpha EMBL BAA07172.1
PRO_5000006465

Experimental info

Non-terminal residue11 EMBL BAA07172.1

Sequences

Sequence LengthMass (Da)Tools
Q30265 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 68F450C6B959EC77

FASTA23826,781
        10         20         30         40         50         60 
LIGLQESWAI KENHVIIQAE FYLKPEESAE FMFDFDGDEI FHVDMGKKET VWRLPEFGHF 

        70         80         90        100        110        120 
ASFEAQGALA NMAVMKANLD IMIKRSNNTP NTNVPPEVTL LPNKPVELGE PNTLICFIDK 

       130        140        150        160        170        180 
FSPPVISVTW LRNGKPVTDG VSQTVFLPRN DHLFRKFHYL PFLPTTEDVY DCKVEHLGLN 

       190        200        210        220        230 
EPLLKHWEYE APAPLPETTE NAVCALGLIV ALVGIIAGTI FIIKGVRKAN TVERRGPL 

« Hide

References

[1]"Cloning of cDNAs and the molecular evolution of a bovine MHC class II DRA gene."
Aida Y., Kohda C., Morooka A., Nakai Y., Ogimoto K., Urao T., Asahina M.
Biochem. Biophys. Res. Commun. 204:195-202(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Japanese Black EMBL BAA07172.1.
Tissue: Tumor lymph node EMBL BAA07172.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
D37955 mRNA. Translation: BAA07172.1.
UniGeneBt.8552.

3D structure databases

ProteinModelPortalQ30265.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOVERGENHBG006862.
InParanoidQ30265.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
3.10.320.10. 1 hit.
InterProIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003006. Ig/MHC_CS.
IPR003597. Ig_C1-set.
IPR011162. MHC_I/II-like_Ag-recog.
IPR014745. MHC_II_a/b_N.
IPR001003. MHC_II_a_N.
[Graphical view]
PfamPF07654. C1-set. 1 hit.
PF00993. MHC_II_alpha. 1 hit.
[Graphical view]
SMARTSM00407. IGc1. 1 hit.
SM00920. MHC_II_alpha. 1 hit.
[Graphical view]
SUPFAMSSF54452. SSF54452. 1 hit.
PROSITEPS50835. IG_LIKE. 1 hit.
PS00290. IG_MHC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ30265_BOVIN
AccessionPrimary (citable) accession number: Q30265
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: July 9, 2014
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)