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Q2YY56 (Q2YY56_STAAB) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.3.2.- EMBL CAI81003.1
Gene names
Name:pbp2 EMBL CAI81003.1
Ordered Locus Names:SAB1314
OrganismStaphylococcus aureus (strain bovine RF122 / ET3-1) [Complete proteome] [HAMAP] EMBL CAI81003.1
Taxonomic identifier273036 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesStaphylococcus

Protein attributes

Sequence length727 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequences

Sequence LengthMass (Da)Tools
Q2YY56 [UniParc].

Last modified December 20, 2005. Version 1.
Checksum: E333F51105B2108F

FASTA72780,398
        10         20         30         40         50         60 
MTENKGSSQP KKNGNNGGKS NSKKNRNVKR TIIKIIGFMI IAFFVVLLLG ILLFAYYAWK 

        70         80         90        100        110        120 
APAFTEAKLQ DPIPAKIYDK NGELVKTLDN GQRHEHVNLK DVPKSMKDAV LATEDNRFYE 

       130        140        150        160        170        180 
HGALDYKRLF GAIGKNLTGG FGSEGASTLT QQVVKDAFLS QHKSIGRKAQ EAYLSYRLEQ 

       190        200        210        220        230        240 
EYSKDDIFQV YLNKIYYSDG VTGIKAAAKY YFNKDLKDLN LAEEAYLAGL PQVPNNYNIY 

       250        260        270        280        290        300 
DHPKAAEDRK NTVLYLMHYH KRITDKQWED AKKIDLKANL VNRTAEERQN IDTNQDSEYN 

       310        320        330        340        350        360 
SYVNFVKSEL MNNKAFKDEN LGNVLQSGIK IYTNMDKDVQ KTLQNDVDNG SFYKNKDQQV 

       370        380        390        400        410        420 
GATILDSKTG GLVAISGGRD FKDVVNRNQA TDPHPTGSSL KPFLAYGPAI ENMKWATNHA 

       430        440        450        460        470        480 
IQDESSYQVD GSTFRNYDVK SHGTVSIYDA LRQSFNIPAL KAWQSVKQNA GNDAPKKFAA 

       490        500        510        520        530        540 
KLGLNYEGDI GPSEVLGGSA SEFSPTQLAS AFAAIANGGT YNNAHSIQKV VTRDGETIEY 

       550        560        570        580        590        600 
DHTSHKAMSD YTAYMLAEML KGTFKPYGSA YGHGVSGVNM GAKTGTGTYG AETYSQYNLP 

       610        620        630        640        650        660 
DNAAKDVWIN GFTPQYTMSV WMGFSKVKQY GENSFVGHSQ QEYPQFLYEN VMSKISSRDG 

       670        680        690        700        710        720 
EDFKRPSSVS GSIPSINVSG SQDNNTTNRS THGGSDTSAN SSGTAQSNNN TRSQQSRNSG 


GLTGIFN 

« Hide

References

« Hide 'large scale' references
[1]"Molecular correlates of host specialization in Staphylococcus aureus."
Herron-Olson L., Fitzgerald J.R., Musser J.M., Kapur V.
PLoS ONE 2:E1120-E1120(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: bovine RF122 / ET3-1.
[2]"Structural insight into the transglycosylation step of bacterial cell-wall biosynthesis."
Lovering A.L., de Castro L.H., Lim D., Strynadka N.C.
Science 315:1402-1405(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.80 ANGSTROMS) OF 60-727.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AJ938182 Genomic DNA. Translation: CAI81003.1.
RefSeqYP_416790.1. NC_007622.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2OLUX-ray2.90A60-727[»]
2OLVX-ray2.80A/B60-727[»]
ProteinModelPortalQ2YY56.
SMRQ2YY56. Positions 67-692.
ModBaseSearch...

Protein-protein interaction databases

STRING273036.SAB1314.

Protein family/group databases

CAZyGT51. Glycosyltransferase Family 51.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAI81003; CAI81003; SAB1314.
GeneID3794117.
KEGGsab:SAB1314.
PATRIC19523509. VBIStaAur92441_1403.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0744.
HOGENOMHOG000041140.
KOK05366.
OMAPHADGNV.
ProtClustDBCLSK885360.

Enzyme and pathway databases

BioCycSAUR273036:GJVS-1336-MONOMER.

Family and domain databases

Gene3D3.40.710.10. 1 hit.
InterProIPR012338. Beta-lactam/transpept-like.
IPR001264. Glyco_trans_51.
IPR001460. PCN-bd_Tpept.
[Graphical view]
PfamPF00912. Transgly. 1 hit.
PF00905. Transpeptidase. 1 hit.
[Graphical view]
SUPFAMSSF56601. PBP_transp_fold. 1 hit.
ProtoNetSearch...

Other

EvolutionaryTraceQ2YY56.

Entry information

Entry nameQ2YY56_STAAB
AccessionPrimary (citable) accession number: Q2YY56
Entry history
Integrated into UniProtKB/TrEMBL: December 20, 2005
Last sequence update: December 20, 2005
Last modified: May 1, 2013
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)