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Q2YXR5

- GLPD_STAAB

UniProt

Q2YXR5 - GLPD_STAAB

Protein

Aerobic glycerol-3-phosphate dehydrogenase

Gene

glpD

Organism
Staphylococcus aureus (strain bovine RF122 / ET3-1)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 60 (01 Oct 2014)
      Sequence version 2 (09 Jan 2007)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.

    Cofactori

    FAD.By similarity

    Pathwayi

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi21 – 4929FADSequence AnalysisAdd
    BLAST

    GO - Molecular functioni

    1. sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity Source: UniProtKB-EC

    GO - Biological processi

    1. glycerol-3-phosphate metabolic process Source: InterPro
    2. glycerol catabolic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    Oxidoreductase

    Keywords - Biological processi

    Glycerol metabolism

    Keywords - Ligandi

    FAD, Flavoprotein

    Enzyme and pathway databases

    BioCyciSAUR273036:GJVS-1184-MONOMER.
    UniPathwayiUPA00618; UER00674.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Aerobic glycerol-3-phosphate dehydrogenase (EC:1.1.5.3)
    Gene namesi
    Name:glpD
    Ordered Locus Names:SAB1162
    OrganismiStaphylococcus aureus (strain bovine RF122 / ET3-1)
    Taxonomic identifieri273036 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcus
    ProteomesiUP000001927: Chromosome

    Subcellular locationi

    Cytoplasm By similarity

    GO - Cellular componenti

    1. glycerol-3-phosphate dehydrogenase complex Source: InterPro

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 557557Aerobic glycerol-3-phosphate dehydrogenasePRO_0000270058Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi273036.SAB1162.

    Structurei

    3D structure databases

    ProteinModelPortaliQ2YXR5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG0578.
    HOGENOMiHOG000004812.
    KOiK00111.
    OrthoDBiEOG651SR7.

    Family and domain databases

    InterProiIPR006076. FAD-dep_OxRdtase.
    IPR000447. G3P_DH_FAD-dep.
    [Graphical view]
    PfamiPF01266. DAO. 1 hit.
    [Graphical view]
    PRINTSiPR01001. FADG3PDH.
    PROSITEiPS00977. FAD_G3PDH_1. 1 hit.
    PS00978. FAD_G3PDH_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q2YXR5-1 [UniParc]FASTAAdd to Basket

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    MALSTFKREH IKKNLRNDEY DLVIIGGGIT GAGIALDASE RGMKVALVEM    50
    QDFAQGTSSR STKLVHGGLR YLKQFQIGVV AETGKERAIV YENGPHVTTP 100
    EWMLLPMHKG GTFGKFSTSI GLGMYDRLAG VKKSERKKML SKKETLAKEP 150
    LVKKEGLKGG GYYVEYRTDD ARLTIEVMKR AAEKGAEIIN YTKSEHFTYD 200
    KNQQVNGVKV IDKLTNENYT IKAKKVVNAA GPWVDDVRSG DYARNNKKLR 250
    LTKGVHVVID QSKFPLGQAV YFDTEKDGRM IFAIPREGKA YVGTTDTFYD 300
    NIKSSPLTTQ EDRDYLIDAI NYMFPSVNVT DEDIESTWAG IRPLIYEEGK 350
    DPSEISRKDE IWEGKSGLLT IAGGKLTGYR HMAQDIVDLV SKRLKKDYGL 400
    TFSPCNTKGL AISGGDVGGS KNFDAFVEQK VDVAKGFGID EDVARRLASK 450
    YGSNVDELFN IAQTSQYHDS KLPLEIYVEL VYSIQQEMVY KPNDFLVRRS 500
    GKMYFNIKDV LDYKDSIIDI MADMLDYSPA QIEAYTEEVE QAIKEAQHGN 550
    NQPAVKE 557
    Length:557
    Mass (Da):62,418
    Last modified:January 9, 2007 - v2
    Checksum:iA20210083A212E82
    GO

    Sequence cautioni

    The sequence CAI80851.1 differs from that shown. Reason: Erroneous initiation.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ938182 Genomic DNA. Translation: CAI80851.1. Different initiation.
    RefSeqiYP_416640.1. NC_007622.1.

    Genome annotation databases

    EnsemblBacteriaiCAI80851; CAI80851; SAB1162.
    GeneIDi3793650.
    KEGGisab:SAB1162.
    PATRICi19523183. VBIStaAur92441_1240.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ938182 Genomic DNA. Translation: CAI80851.1 . Different initiation.
    RefSeqi YP_416640.1. NC_007622.1.

    3D structure databases

    ProteinModelPortali Q2YXR5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 273036.SAB1162.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAI80851 ; CAI80851 ; SAB1162 .
    GeneIDi 3793650.
    KEGGi sab:SAB1162.
    PATRICi 19523183. VBIStaAur92441_1240.

    Phylogenomic databases

    eggNOGi COG0578.
    HOGENOMi HOG000004812.
    KOi K00111.
    OrthoDBi EOG651SR7.

    Enzyme and pathway databases

    UniPathwayi UPA00618 ; UER00674 .
    BioCyci SAUR273036:GJVS-1184-MONOMER.

    Family and domain databases

    InterProi IPR006076. FAD-dep_OxRdtase.
    IPR000447. G3P_DH_FAD-dep.
    [Graphical view ]
    Pfami PF01266. DAO. 1 hit.
    [Graphical view ]
    PRINTSi PR01001. FADG3PDH.
    PROSITEi PS00977. FAD_G3PDH_1. 1 hit.
    PS00978. FAD_G3PDH_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Molecular correlates of host specialization in Staphylococcus aureus."
      Herron-Olson L., Fitzgerald J.R., Musser J.M., Kapur V.
      PLoS ONE 2:E1120-E1120(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: bovine RF122 / ET3-1.

    Entry informationi

    Entry nameiGLPD_STAAB
    AccessioniPrimary (citable) accession number: Q2YXR5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 9, 2007
    Last sequence update: January 9, 2007
    Last modified: October 1, 2014
    This is version 60 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3