Voltage-dependent P/Q-type calcium channel alpha-1A subunit - Rattus norvegicus (Rat)

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Unreviewed, UniProtKB/TrEMBL Q2YS38 (Q2YS38_RAT)

Last modified November 3, 2009. Version 19. History...

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Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

Names and origin

Protein names

Submitted name:
Voltage-dependent P/Q-type calcium channel alpha-1A subunit EMBL CAJ09864.1

Gene names

Name:

Cacna1a EMBL CAJ09864.1 RGD 2244

Organism

Rattus norvegicus (Rat) EMBL CAJ09864.1

Taxonomic identifier

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	135 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level.

Ontologies

Gene Ontology (GO)
Biological process	calcium ion transport Inferred from direct assay. Source: RGD synaptic transmission Inferred from mutant phenotype. Source: RGD
Cellular component	perikaryon Inferred from direct assay. Source: RGD voltage-gated calcium channel complex Inferred from direct assay. Source: RGD
Molecular function	voltage-gated calcium channel activity Inferred from direct assay. Source: RGD
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Experimental info

Non-terminal residue

1

EMBL CAJ09864.1

Non-terminal residue

1

EMBL CAJ09864.1

Sequences

Sequence

Length

Mass (Da)

Tools

Q2YS38-1 [UniParc].

Last modified December 20, 2005. Version 1.
Checksum: 1ADDFCFF2593872E
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135

14,213

        10         20         30         40         50         60 
THRQGSSSVS GSPAPSTSGT STPRRGRRQL PQTPCTPRPL VSYSPAPRRP AARRMAGPPA 

        70         80         90        100        110        120 
PPGGSPRGCR RAPRWPAHAP EGPRPRGADY TEPDSPREPP GGAHEPAPRS PRTPRAAGCA 

       130 
SPRHGRRLPN GYYAG

References

[1]

"Alternative splicing generates a smaller assortment of CaV2.1 transcripts in cerebellar Purkinje cells than in the cerebellum."
Kanumilli S., Tringham E.W., Payne C.E., Dupere J.R., Venkateswarlu K., Usowicz M.M.
Physiol. Genomics (Online) 24:86-96(2006) [PubMed: 16278278] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Wistar EMBL CAJ09864.1.
Tissue: Cerebellar vermis EMBL CAJ09864.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM040229 mRNA. Translation: CAJ09864.1.
IPI	IPI00211870.
UniGene	Rn.87769
3D structure databases
ModBase	Search...
Phylogenomic databases
HOVERGEN	Q2YS38.
Gene expression databases
Genevestigator	Q2YS38.
Family and domain databases
InterPro	IPR005448. VDCC_P/Q_a1su. [Graphical view]
PANTHER	PTHR10037:SF59. PQVDCCAlpha1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q2YS38_RAT

Accession

Primary (citable) accession number: Q2YS38

Entry history

Integrated into UniProtKB/TrEMBL:	December 20, 2005
Last sequence update:	December 20, 2005
Last modified:	November 3, 2009
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information