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Q2YRA1

- RS3_BRUA2

UniProt

Q2YRA1 - RS3_BRUA2

Protein

30S ribosomal protein S3

Gene

rpsC

Organism
Brucella abortus (strain 2308)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 51 (01 Oct 2014)
      Sequence version 1 (07 Feb 2006)
      Previous versions | rss
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    Functioni

    Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.UniRule annotation

    GO - Molecular functioni

    1. mRNA binding Source: UniProtKB-HAMAP
    2. rRNA binding Source: UniProtKB-HAMAP
    3. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciBABO359391:GKDV-1271-MONOMER.
    BMEL359391:GJOQ-1271-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S3UniRule annotation
    Gene namesi
    Name:rpsCUniRule annotation
    Ordered Locus Names:BAB1_1249
    OrganismiBrucella abortus (strain 2308)
    Taxonomic identifieri359391 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
    ProteomesiUP000002719: Chromosome I

    Subcellular locationi

    GO - Cellular componenti

    1. small ribosomal subunit Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 23623630S ribosomal protein S3PRO_0000230683Add
    BLAST

    Proteomic databases

    PRIDEiQ2YRA1.

    Interactioni

    Subunit structurei

    Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14.UniRule annotation

    Protein-protein interaction databases

    STRINGi359391.BAB1_1249.

    Structurei

    3D structure databases

    ProteinModelPortaliQ2YRA1.
    SMRiQ2YRA1. Positions 2-207.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini39 – 10769KH type-2UniRule annotationAdd
    BLAST

    Sequence similaritiesi

    Belongs to the ribosomal protein S3P family.UniRule annotation
    Contains 1 KH type-2 domain.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0092.
    HOGENOMiHOG000210610.
    KOiK02982.
    OMAiIARAEWY.
    OrthoDBiEOG6K13X3.

    Family and domain databases

    Gene3Di3.30.1140.32. 1 hit.
    3.30.300.20. 1 hit.
    HAMAPiMF_01309_B. Ribosomal_S3_B.
    InterProiIPR004087. KH_dom.
    IPR015946. KH_dom-like_a/b.
    IPR004044. KH_dom_type_2.
    IPR009019. KH_prok-type.
    IPR005704. Ribosomal_S3_bac.
    IPR001351. Ribosomal_S3_C.
    IPR018280. Ribosomal_S3_CS.
    [Graphical view]
    PfamiPF07650. KH_2. 1 hit.
    PF00189. Ribosomal_S3_C. 1 hit.
    [Graphical view]
    SMARTiSM00322. KH. 1 hit.
    [Graphical view]
    SUPFAMiSSF54814. SSF54814. 1 hit.
    SSF54821. SSF54821. 1 hit.
    TIGRFAMsiTIGR01009. rpsC_bact. 1 hit.
    PROSITEiPS50823. KH_TYPE_2. 1 hit.
    PS00548. RIBOSOMAL_S3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q2YRA1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGQKINPIGL RLGINRTWDS RWYANTGEYG KLLHEDVKIR EFLTEELKQA    50
    AISKIVIERP HKKCRVTIHS ARPGIIIGKK GADIEKLRKK LSEMTNADTS 100
    LNIVEVRKPE VDATLIAQSI AQQLERRVAF RRAMKRAVQS AMRLGAEGIR 150
    INCSGRLGGA EIARMEWYRE GRVPLHTLRA DIDYGTAEAK TAYGICGVKV 200
    WVFKGEILEH DPMASERRAV EGDNQGSSSN RRRENA 236
    Length:236
    Mass (Da):26,604
    Last modified:February 7, 2006 - v1
    Checksum:iED11EE4CDCBC20CC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM040264 Genomic DNA. Translation: CAJ11205.1.
    RefSeqiYP_414635.1. NC_007618.1.

    Genome annotation databases

    EnsemblBacteriaiCAJ11205; CAJ11205; BAB1_1249.
    GeneIDi3788941.
    KEGGibmf:BAB1_1249.
    PATRICi17845457. VBIBruMel86222_1298.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM040264 Genomic DNA. Translation: CAJ11205.1 .
    RefSeqi YP_414635.1. NC_007618.1.

    3D structure databases

    ProteinModelPortali Q2YRA1.
    SMRi Q2YRA1. Positions 2-207.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 359391.BAB1_1249.

    Proteomic databases

    PRIDEi Q2YRA1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAJ11205 ; CAJ11205 ; BAB1_1249 .
    GeneIDi 3788941.
    KEGGi bmf:BAB1_1249.
    PATRICi 17845457. VBIBruMel86222_1298.

    Phylogenomic databases

    eggNOGi COG0092.
    HOGENOMi HOG000210610.
    KOi K02982.
    OMAi IARAEWY.
    OrthoDBi EOG6K13X3.

    Enzyme and pathway databases

    BioCyci BABO359391:GKDV-1271-MONOMER.
    BMEL359391:GJOQ-1271-MONOMER.

    Family and domain databases

    Gene3Di 3.30.1140.32. 1 hit.
    3.30.300.20. 1 hit.
    HAMAPi MF_01309_B. Ribosomal_S3_B.
    InterProi IPR004087. KH_dom.
    IPR015946. KH_dom-like_a/b.
    IPR004044. KH_dom_type_2.
    IPR009019. KH_prok-type.
    IPR005704. Ribosomal_S3_bac.
    IPR001351. Ribosomal_S3_C.
    IPR018280. Ribosomal_S3_CS.
    [Graphical view ]
    Pfami PF07650. KH_2. 1 hit.
    PF00189. Ribosomal_S3_C. 1 hit.
    [Graphical view ]
    SMARTi SM00322. KH. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54814. SSF54814. 1 hit.
    SSF54821. SSF54821. 1 hit.
    TIGRFAMsi TIGR01009. rpsC_bact. 1 hit.
    PROSITEi PS50823. KH_TYPE_2. 1 hit.
    PS00548. RIBOSOMAL_S3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 2308.

    Entry informationi

    Entry nameiRS3_BRUA2
    AccessioniPrimary (citable) accession number: Q2YRA1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 4, 2006
    Last sequence update: February 7, 2006
    Last modified: October 1, 2014
    This is version 51 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Brucella abortus strain 2308
      Brucella abortus (strain 2308): entries and gene names
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3