Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q2YQQ9 (Q2YQQ9_BRUA2) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 61. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=2.3.1.41 EMBL CAJ12129.1
Gene names
Name:fabB EMBL CAJ12129.1
Ordered Locus Names:BAB1_2173 EMBL CAJ12129.1
OrganismBrucella abortus (strain 2308) [Complete proteome] [HAMAP] EMBL CAJ12129.1
Taxonomic identifier359391 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella

Protein attributes

Sequence length407 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the beta-ketoacyl-ACP synthases family. RuleBase RU003694

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding2941Sodium PDB 3MQD PDB 3LRF PDB 3U0E PDB 3U0F
Metal binding2951Sodium; via carbonyl oxygen PDB 3MQD PDB 3LRF PDB 3U0E PDB 3U0F
Metal binding3421Sodium PDB 3MQD PDB 3LRF PDB 3U0E PDB 3U0F
Metal binding3881Sodium PDB 3MQD PDB 3LRF PDB 3U0E PDB 3U0F
Metal binding3891Sodium; via carbonyl oxygen PDB 3MQD PDB 3LRF PDB 3U0E PDB 3U0F

Sequences

Sequence LengthMass (Da)Tools
Q2YQQ9 [UniParc].

Last modified February 7, 2006. Version 1.
Checksum: 26DB912A67F0AD07

FASTA40743,311
        10         20         30         40         50         60 
MRRVVVTGMG IVSSIGSNTE EVTASLREAK SGISRAEEYA ELGFRCQVHG APDIDIESLV 

        70         80         90        100        110        120 
DRRAMRFHGR GTAWNHIAMD QAIADAGLTE EEVSNERTGI IMGSGGPSTR TIVDSADITR 

       130        140        150        160        170        180 
EKGPKRVGPF AVPKAMSSTA SATLATFFKI KGINYSISSA CATSNHCIGN AYEMIQYGKQ 

       190        200        210        220        230        240 
DRMFAGGCED LDWTLSVLFD AMGAMSSKYN DTPSTASRAY DKNRDGFVIA GGAGVLVLED 

       250        260        270        280        290        300 
LETALARGAK IYGEIVGYGA TSDGYDMVAP SGEGAIRCMK MALSTVTSKI DYINPHATST 

       310        320        330        340        350        360 
PAGDAPEIEA IRQIFGAGDV CPPIAATKSL TGHSLGATGV QEAIYSLLMM QNNFICESAH 

       370        380        390        400 
IEELDPAFAD MPIVRKRIDN VQLNTVLSNS FGFGGTNATL VFQRYQG 

« Hide

References

« Hide 'large scale' references
[1]"Whole-genome analyses of speciation events in pathogenic Brucellae."
Microbial Genomics Group, Lawrence Livermore National Laboratory, and the Genome Analysis Group, Oak Ridge National Laboratory
Chain P.S., Comerci D.J., Tolmasky M.E., Larimer F.W., Malfatti S.A., Vergez L.M., Aguero F., Land M.L., Ugalde R.A., Garcia E.
Infect. Immun. 73:8353-8361(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 2308 EMBL CAJ12129.1.
[2]"CRYSTAL structure of beta-ketoacyl synthase from brucella melitensis."
Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Abendroth J., Edwards T., Staker B.
Submitted (FEB-2010) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.60 ANGSTROMS) IN COMPLEX WITH SODIUM.
[3]"Crystal structure of beta-ketoacyl synthase from brucella melitensis with FOL 0758, (1-methyl-1h-indazol-3-yl) methanol."
Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Abendroth J., Gardberg A., Sankaran B., Staker B.
Submitted (APR-2010) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.25 ANGSTROMS) IN COMPLEX WITH SODIUM.
[4]"Crystal structure of beta-ketoacyl synthase from Brucella melitensis in complex with fragment 9320."
Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Abendroth J., Sankaran B., Davies D.R., Leonard J., Staker B.
Submitted (SEP-2011) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.60 ANGSTROMS) IN COMPLEX WITH SODIUM.
[5]"The structure of Beta-ketoacyl synthase from Brucella melitensis bound to the fragment 7-hydroxycoumarin."
Clifton M.C., Abendroth J., Seattle Structural Genomics Center for Infectious Disease
Submitted (SEP-2011) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.25 ANGSTROMS) IN COMPLEX WITH SODIUM.
[6]"Crystal structure of beta-ketoacyl synthase from Brucella melitensis in complex with platencin."
Abendroth J., Fairman J.W., Lorimer D., Edwards T.
Submitted (MAR-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM040264 Genomic DNA. Translation: CAJ12129.1.
RefSeqYP_415493.1. NC_007618.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3LRFX-ray1.60A1-407[»]
3MQDX-ray1.25A1-407[»]
3U0EX-ray1.60A1-407[»]
3U0FX-ray1.25A1-407[»]
4JV3X-ray1.70A1-407[»]
ProteinModelPortalQ2YQQ9.
SMRQ2YQQ9. Positions 1-406.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING359391.BAB1_2173.

Proteomic databases

PRIDEQ2YQQ9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAJ12129; CAJ12129; BAB1_2173.
GeneID3788695.
KEGGbmf:BAB1_2173.
PATRIC17847453. VBIBruMel86222_2262.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0304.
HOGENOMHOG000060165.
KOK00647.
OMAFNPEYAE.
OrthoDBEOG6DG2SR.

Enzyme and pathway databases

BioCycBABO359391:GKDV-2227-MONOMER.
BMEL359391:GJOQ-2227-MONOMER.

Family and domain databases

Gene3D3.40.47.10. 2 hits.
InterProIPR018201. Ketoacyl_synth_AS.
IPR014031. Ketoacyl_synth_C.
IPR014030. Ketoacyl_synth_N.
IPR016039. Thiolase-like.
IPR016038. Thiolase-like_subgr.
[Graphical view]
PfamPF00109. ketoacyl-synt. 1 hit.
PF02801. Ketoacyl-synt_C. 1 hit.
[Graphical view]
SUPFAMSSF53901. SSF53901. 2 hits.
PROSITEPS00606. B_KETOACYL_SYNTHASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ2YQQ9.

Entry information

Entry nameQ2YQQ9_BRUA2
AccessionPrimary (citable) accession number: Q2YQQ9
Entry history
Integrated into UniProtKB/TrEMBL: February 7, 2006
Last sequence update: February 7, 2006
Last modified: June 11, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)