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Q2YQL5 (CBID_BRUA2) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative cobalt-precorrin-6A synthase [deacetylating]

EC=2.1.1.-
Gene names
Name:cbiD
Ordered Locus Names:BAB1_1318
OrganismBrucella abortus (strain 2308) [Complete proteome] [HAMAP]
Taxonomic identifier359391 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella

Protein attributes

Sequence length368 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

May catalyze the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A By similarity. HAMAP-Rule MF_00787

Pathway

Cofactor biosynthesis; adenosylcobalamin biosynthesis; cob(II)yrinate a,c-diamide from sirohydrochlorin (anaerobic route): step 6/10. HAMAP-Rule MF_00787

Sequence similarities

Belongs to the CbiD family.

Ontologies

Keywords
   Biological processCobalamin biosynthesis
   Molecular functionTransferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcobalamin biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functiontransferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 368368Putative cobalt-precorrin-6A synthase [deacetylating] HAMAP-Rule MF_00787
PRO_0000257749

Sequences

Sequence LengthMass (Da)Tools
Q2YQL5 [UniParc].

Last modified February 7, 2006. Version 1.
Checksum: 5F3040A081BDFFDF

FASTA36838,530
        10         20         30         40         50         60 
MNDETTPANK NPEKAELRCG WTTGACATAA TKAALTALIT GEFPDPVGII LPKGEVPYFQ 

        70         80         90        100        110        120 
LAYEGLGEGY AMAGIVKDAG DDPDVTHGAT IISTVYPAPP GTGIIFRAGE GVGTVTREGL 

       130        140        150        160        170        180 
AIPPGEAAIN PVPRRMMTEI CEAICAEYGL PADLVITISV PGGEEIAQKT WNPRLGIIGG 

       190        200        210        220        230        240 
ISILGTTGVV HPFSCSAWIH SIHRGIDVAR AAGQKHVLGA TGSTSEDAAQ ALYNLPDFAI 

       250        260        270        280        290        300 
LDMGDFAGGV LKYLREHPID RLTIAGGFAK LTKLAQGALD LHSSRSQVDK GFLWQIAERA 

       310        320        330        340        350        360 
GAPAGMKERI LLANTAMEVL ELTQSIGIDI AGPIALEARQ TALKTLRGAP VEVEIIVTDR 


KGNILARV 

« Hide

References

[1]"Whole-genome analyses of speciation events in pathogenic Brucellae."
Chain P.S., Comerci D.J., Tolmasky M.E., Larimer F.W., Malfatti S.A., Vergez L.M., Aguero F., Land M.L., Ugalde R.A., Garcia E.
Infect. Immun. 73:8353-8361(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 2308.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM040264 Genomic DNA. Translation: CAJ11274.1.
RefSeqYP_414698.1. NC_007618.1.

3D structure databases

ProteinModelPortalQ2YQL5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING359391.BAB1_1318.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAJ11274; CAJ11274; BAB1_1318.
GeneID3788641.
KEGGbmf:BAB1_1318.
PATRIC17845613. VBIBruMel86222_1371.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1903.
HOGENOMHOG000009126.
KOK02188.
OMAMMVHSKS.
OrthoDBEOG6WX4M7.
ProtClustDBPRK00075.

Enzyme and pathway databases

BioCycBABO359391:GKDV-1345-MONOMER.
BMEL359391:GJOQ-1345-MONOMER.
UniPathwayUPA00148; UER00227.

Family and domain databases

HAMAPMF_00787. CbiD.
InterProIPR002748. Cbl_biosynth_CbiD.
[Graphical view]
PfamPF01888. CbiD. 1 hit.
[Graphical view]
PIRSFPIRSF026782. CbiD. 1 hit.
SUPFAMSSF111342. SSF111342. 1 hit.
TIGRFAMsTIGR00312. cbiD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameCBID_BRUA2
AccessionPrimary (citable) accession number: Q2YQL5
Entry history
Integrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: February 7, 2006
Last modified: February 19, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways

Brucella abortus strain 2308

Brucella abortus (strain 2308): entries and gene names