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Q2YPM3 (RECF_BRUA2) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
DNA replication and repair protein recF
Gene names
Name:recF
Ordered Locus Names:BAB1_0003
OrganismBrucella abortus (strain 2308) [Complete proteome] [HAMAP]
Taxonomic identifier359391 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Brucellaceae › Brucella

Protein attributes

Sequence length384 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

The recF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP By similarity. HAMAP MF_00365

Subcellular location

Cytoplasm By similarity HAMAP MF_00365.

Sequence similarities

Belongs to the recF family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 384384DNA replication and repair protein recF HAMAP MF_00365
PRO_0000236113

Regions

Nucleotide binding43 – 508ATP Potential

Sequences

Sequence LengthMass (Da)Tools
Q2YPM3 [UniParc].

Last modified February 7, 2006. Version 1.
Checksum: 418A748CCCE460CC

FASTA38441,494
        10         20         30         40         50         60 
MEAKDHIERR PDRVSIRRLK LVNFRNYAEL SLPLGPGHVV LTGENGSGKT NLIEAISFLS 

        70         80         90        100        110        120 
PGRGLRRAAY DDVARANAEG GFAIHAALDC MIYGDAEIGT GTAGGGEGGR KVRINRIAAS 

       130        140        150        160        170        180 
ADDLLDYARI LWVVPSMDGL FTGGASDRRR FLDRMVLAID TAHGKRVLDY EKAMRSRNRL 

       190        200        210        220        230        240 
LNDGSNDDQW LDAIENQMAE LGTAIAAARA QAMRLIAAMI ERLPAEGPFP KADCFLEGAL 

       250        260        270        280        290        300 
ESRIGVEAAL DLEEDFRRTL RDGRARDRAA GRTLDGPHRT DLIVQHRPKS MPAALCSTGE 

       310        320        330        340        350        360 
QKALLIGLIL AHARLTAELS GMAPILLLDE IAAHLDMGRR AALFGILDEL GGQAFMTGTD 

       370        380 
RALFDALAGD AQFFNVSAGQ LTGI

« Hide

References

[1]"Whole-genome analyses of speciation events in pathogenic Brucellae."
Chain P.S., Comerci D.J., Tolmasky M.E., Larimer F.W., Malfatti S.A., Vergez L.M., Aguero F., Land M.L., Ugalde R.A., Garcia E.
Infect. Immun. 73:8353-8361(2005) [PubMed: 16299333] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 2308.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM040264 Genomic DNA. Translation: CAJ09959.1.
RefSeqYP_413509.1. NC_007618.1.

3D structure databases

ProteinModelPortalQ2YPM3.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ2YPM3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3786823.
GenomeReviewsGene locus BAB1_0003 in contig AM040264_GR.
KEGGbmf:BAB1_0003.
PATRIC17842821. VBIBruMel86222_0004.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1195.
HOGENOMHBG645124.
OMAGQQRTLV.
ProtClustDBPRK00064.

Enzyme and pathway databases

BioCycBMEL359391:BAB1_0003-MONOMER.

Family and domain databases

HAMAPMF_00365. RecF.
[Tree]
InterProIPR003593. ATPase_AAA+_core.
IPR001238. DNA-binding_RecF.
IPR018078. DNA-binding_RecF_CS.
IPR003395. RecF/RecN/SMC.
IPR007406. Scp_MukB_N.
[Graphical view]
Gene3DG3DSA:3.40.1140.10. Scp_MukB_N. 2 hits.
KOK03629.
PfamPF02463. SMC_N. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
[Graphical view]
TIGRFAMsTIGR00611. Recf. 1 hit.
PROSITEPS00617. RECF_1. 1 hit.
PS00618. RECF_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRECF_BRUA2
AccessionPrimary (citable) accession number: Q2YPM3
Entry history
Integrated into UniProtKB/Swiss-Prot: May 16, 2006
Last sequence update: February 7, 2006
Last modified: January 25, 2012
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Brucella abortus strain 2308

Brucella abortus (strain 2308): entries and gene names

SIMILARITY comments

Index of protein domains and families

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