Q2YND8 (RL13_BRUA2) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L13

Gene names

Name:	rplM
Ordered Locus Names:	BAB1_0811

Organism

Brucella abortus (strain 2308) [Complete proteome] [HAMAP]

Taxonomic identifier

359391 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Brucellaceae › Brucella › Brucella abortus

Protein attributes

Sequence length	154 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly By similarity. HAMAP-Rule MF_01366
Subunit structure	Part of the 50S ribosomal subunit By similarity.
Sequence similarities	Belongs to the ribosomal protein L13P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 154	154	50S ribosomal protein L13 HAMAP-Rule MF_01366		PRO_0000261696

Sequences

	Sequence		Length	Mass (Da)
	Q2YND8 [UniParc]. Last modified February 7, 2006. Version 1. Checksum: 94EA3F7051AAF413	FASTA	154	17,301
	10 20 30 40 50 60 MATFSQKPAE VVKKWVLIDA EGLVVGRLAS LVANRLRGKH KATFTPHVDD GDNVIIINAD 70 80 90 100 110 120 KVVLTGKKYT DKKYYWHTGH PGGIKERTAR QILEGRFPER VLEKAIERMI PRGPLGRRQM 130 140 150 KNLRVNAGPN HQHEAQQPEV LDVAALNRKN KGNA

References

[1]

"Whole-genome analyses of speciation events in pathogenic Brucellae." Chain P.S., Comerci D.J., Tolmasky M.E., Larimer F.W., Malfatti S.A., Vergez L.M., Aguero F., Land M.L., Ugalde R.A., Garcia E. Infect. Immun. 73:8353-8361(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 2308.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM040264 Genomic DNA. Translation: CAJ10767.1.
RefSeq	YP_414244.1. NC_007618.1.
3D structure databases
ProteinModelPortal	Q2YND8.
SMR	Q2YND8. Positions 1-143.
ModBase	Search...
Protein-protein interaction databases
STRING	359391.BAB1_0811.
Proteomic databases
PRIDE	Q2YND8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAJ10767; CAJ10767; BAB1_0811.
GeneID	3787505.
KEGG	bmf:BAB1_0811.
PATRIC	17844531. VBIBruMel86222_0846.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0102.
HOGENOM	HOG000225286.
KO	K02871.
OMA	YTPHMDC.
ProtClustDB	PRK09216.
Enzyme and pathway databases
BioCyc	BMEL359391:GJOQ-823-MONOMER.
Family and domain databases
Gene3D	3.90.1180.10. 1 hit.
HAMAP	MF_01366_B. Ribosomal_L13_B.
InterPro	IPR005822. Ribosomal_L13. IPR005823. Ribosomal_L13_bac-type. IPR023564. Ribosomal_L13_dom. [Graphical view]
PANTHER	PTHR11545. PTHR11545. 1 hit.
Pfam	PF00572. Ribosomal_L13. 1 hit. [Graphical view]
PIRSF	PIRSF002181. Ribosomal_L13. 1 hit.
SUPFAM	SSF52161. Ribosomal_L13. 1 hit.
TIGRFAMs	TIGR01066. rplM_bact. 1 hit.
PROSITE	PS00783. RIBOSOMAL_L13. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL13_BRUA2

Accession

Primary (citable) accession number: Q2YND8

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 28, 2006
Last sequence update:	February 7, 2006
Last modified:	May 1, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program