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Q2YND8 (RL13_BRUA2) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L13
Gene names
Name:rplM
Ordered Locus Names:BAB1_0811
OrganismBrucella abortus (strain 2308) [Complete proteome] [HAMAP]
Taxonomic identifier359391 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella

Protein attributes

Sequence length154 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly By similarity. HAMAP-Rule MF_01366

Subunit structure

Part of the 50S ribosomal subunit By similarity. HAMAP-Rule MF_01366

Sequence similarities

Belongs to the ribosomal protein L13P family.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 15415450S ribosomal protein L13 HAMAP-Rule MF_01366
PRO_0000261696

Sequences

Sequence LengthMass (Da)Tools
Q2YND8 [UniParc].

Last modified February 7, 2006. Version 1.
Checksum: 94EA3F7051AAF413

FASTA15417,301
        10         20         30         40         50         60 
MATFSQKPAE VVKKWVLIDA EGLVVGRLAS LVANRLRGKH KATFTPHVDD GDNVIIINAD 

        70         80         90        100        110        120 
KVVLTGKKYT DKKYYWHTGH PGGIKERTAR QILEGRFPER VLEKAIERMI PRGPLGRRQM 

       130        140        150 
KNLRVNAGPN HQHEAQQPEV LDVAALNRKN KGNA 

« Hide

References

[1]"Whole-genome analyses of speciation events in pathogenic Brucellae."
Chain P.S., Comerci D.J., Tolmasky M.E., Larimer F.W., Malfatti S.A., Vergez L.M., Aguero F., Land M.L., Ugalde R.A., Garcia E.
Infect. Immun. 73:8353-8361(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 2308.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM040264 Genomic DNA. Translation: CAJ10767.1.
RefSeqYP_414244.1. NC_007618.1.

3D structure databases

ProteinModelPortalQ2YND8.
SMRQ2YND8. Positions 1-143.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING359391.BAB1_0811.

Proteomic databases

PRIDEQ2YND8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAJ10767; CAJ10767; BAB1_0811.
GeneID3787505.
KEGGbmf:BAB1_0811.
PATRIC17844531. VBIBruMel86222_0846.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0102.
HOGENOMHOG000225286.
KOK02871.
OMAHQEFLKM.
OrthoDBEOG628FBD.

Enzyme and pathway databases

BioCycBABO359391:GKDV-823-MONOMER.
BMEL359391:GJOQ-823-MONOMER.

Family and domain databases

Gene3D3.90.1180.10. 1 hit.
HAMAPMF_01366. Ribosomal_L13.
InterProIPR005822. Ribosomal_L13.
IPR005823. Ribosomal_L13_bac-type.
IPR023564. Ribosomal_L13_dom.
[Graphical view]
PANTHERPTHR11545. PTHR11545. 1 hit.
PfamPF00572. Ribosomal_L13. 1 hit.
[Graphical view]
PIRSFPIRSF002181. Ribosomal_L13. 1 hit.
SUPFAMSSF52161. SSF52161. 1 hit.
TIGRFAMsTIGR01066. rplM_bact. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRL13_BRUA2
AccessionPrimary (citable) accession number: Q2YND8
Entry history
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: February 7, 2006
Last modified: May 14, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

Brucella abortus strain 2308

Brucella abortus (strain 2308): entries and gene names