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Q2YMG9 (RS6_BRUA2) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S6
Gene names
Name:rpsF
Ordered Locus Names:BAB1_0480
OrganismBrucella abortus (strain 2308) [Complete proteome] [HAMAP]
Taxonomic identifier359391 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella

Protein attributes

Sequence length148 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Binds together with S18 to 16S ribosomal RNA By similarity. HAMAP-Rule MF_00360

Sequence similarities

Belongs to the ribosomal protein S6P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 14814830S ribosomal protein S6 HAMAP-Rule MF_00360
PRO_0000229527

Sequences

Sequence LengthMass (Da)Tools
Q2YMG9 [UniParc].

Last modified February 7, 2006. Version 1.
Checksum: E2E6F0BD041E1E1F

FASTA14817,096
        10         20         30         40         50         60 
MALYEHVLLA RQDISQQQVD ALVEQFKGVL EANGGKFGKV ENWGLRPLTY RIKKNRKAYY 

        70         80         90        100        110        120 
TLVNIDAPAA AVAEMERQMR INEDVLRFLT VRVEEHEEGQ SAMLTRRDDR RERDGDDRPR 

       130        140 
RREGGFDRGD RGDRGPRRPR DNEAGEGA 

« Hide

References

[1]"Whole-genome analyses of speciation events in pathogenic Brucellae."
Chain P.S., Comerci D.J., Tolmasky M.E., Larimer F.W., Malfatti S.A., Vergez L.M., Aguero F., Land M.L., Ugalde R.A., Garcia E.
Infect. Immun. 73:8353-8361(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 2308.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM040264 Genomic DNA. Translation: CAJ10436.1.
RefSeqYP_413940.1. NC_007618.1.

3D structure databases

ProteinModelPortalQ2YMG9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING359391.BAB1_0480.

Proteomic databases

PRIDEQ2YMG9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAJ10436; CAJ10436; BAB1_0480.
GeneID3788943.
KEGGbmf:BAB1_0480.
PATRIC17843832. VBIBruMel86222_0501.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0360.
HOGENOMHOG000040439.
KOK02990.
OMAITEASPM.
OrthoDBEOG6P33DH.
ProtClustDBPRK00453.

Enzyme and pathway databases

BioCycBABO359391:GKDV-487-MONOMER.
BMEL359391:GJOQ-487-MONOMER.

Family and domain databases

Gene3D3.30.70.60. 1 hit.
HAMAPMF_00360. Ribosomal_S6.
InterProIPR000529. Ribosomal_S6.
IPR020814. Ribosomal_S6_plastid/chlpt.
IPR014717. Transl_elong_EF1B/ribosomal_S6.
[Graphical view]
PfamPF01250. Ribosomal_S6. 1 hit.
[Graphical view]
SUPFAMSSF54995. SSF54995. 1 hit.
TIGRFAMsTIGR00166. S6. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRS6_BRUA2
AccessionPrimary (citable) accession number: Q2YMG9
Entry history
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: February 7, 2006
Last modified: February 19, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

Brucella abortus strain 2308

Brucella abortus (strain 2308): entries and gene names