Q2YM05 (RL23_BRUA2) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L23

Gene names

Name:	rplW
Ordered Locus Names:	BAB1_1253

Organism

Brucella abortus (strain 2308) [Complete proteome] [HAMAP]

Taxonomic identifier

359391 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Brucellaceae › Brucella

Protein attributes

Sequence length	97 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome By similarity. HAMAP MF_01369_B
Subunit structure	Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome By similarity.
Sequence similarities	Belongs to the ribosomal protein L23P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	nucleotide binding Inferred from electronic annotation. Source: InterPro rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 97	97	50S ribosomal protein L23 HAMAP MF_01369_B		PRO_0000272716

Sequences

	Sequence		Length	Mass (Da)
	Q2YM05 [UniParc]. Last modified February 7, 2006. Version 1. Checksum: BE282E3883133BA6	FASTA	97	10,517
	10 20 30 40 50 60 MTDLRHYDVI VSPVITEKST IVSEHNQVVF NVARKATKPE IKAAVEALFG VKVTAVNTAV 70 80 90 RKGKVKRFRG LVGRQSDVKK AIVTLAEGQS IDVSTGL

References

[1]

"Whole-genome analyses of speciation events in pathogenic Brucellae." Chain P.S., Comerci D.J., Tolmasky M.E., Larimer F.W., Malfatti S.A., Vergez L.M., Aguero F., Land M.L., Ugalde R.A., Garcia E. Infect. Immun. 73:8353-8361(2005) [PubMed: 16299333] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 2308.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM040264 Genomic DNA. Translation: CAJ11209.1.
RefSeq	YP_414639.1. NC_007618.1.
3D structure databases
ProteinModelPortal	Q2YM05.
ModBase	Search...
Protein-protein interaction databases
STRING	Q2YM05.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3788925.
GenomeReviews	Gene locus BAB1_1253 in contig AM040264_GR.
KEGG	bmf:BAB1_1253.
PATRIC	17845465. VBIBruMel86222_1302.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0089.
HOGENOM	HBG439330.
OMA	WKKAYVS.
ProtClustDB	PRK05738.
Enzyme and pathway databases
BioCyc	BMEL359391:BAB1_1253-MONOMER.
Family and domain databases
HAMAP	MF_01369_B. Ribosomal_L23_B. [Tree]
InterPro	IPR012677. Nucleotide-bd_a/b_plait. IPR012678. Ribosomal_L23/L15e_core_dom. IPR013025. Ribosomal_L25/23. [Graphical view]
Gene3D	G3DSA:3.30.70.330. a_b_plait_nuc_bd. 1 hit.
KO	K02892.
Pfam	PF00276. Ribosomal_L23. 1 hit. [Graphical view]
SUPFAM	SSF54189. L23_L15e_core. 1 hit.
PROSITE	PS00050. RIBOSOMAL_L23. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL23_BRUA2

Accession

Primary (citable) accession number: Q2YM05

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 23, 2007
Last sequence update:	February 7, 2006
Last modified:	January 25, 2012
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program