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Q2YM03

- RL3_BRUA2

UniProt

Q2YM03 - RL3_BRUA2

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Protein
50S ribosomal protein L3
Gene
rplC, BAB1_1255
Organism
Brucella abortus (strain 2308)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit By similarity.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciBABO359391:GKDV-1277-MONOMER.
BMEL359391:GJOQ-1277-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L3
Gene namesi
Name:rplC
Ordered Locus Names:BAB1_1255
OrganismiBrucella abortus (strain 2308)
Taxonomic identifieri359391 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
ProteomesiUP000002719: Chromosome I

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 23723750S ribosomal protein L3UniRule annotation
PRO_0000241324Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei151 – 1511N5-methylglutamine By similarity

Post-translational modificationi

Methylated by PrmB By similarity.UniRule annotation

Keywords - PTMi

Methylation

Proteomic databases

PRIDEiQ2YM03.

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19 By similarity.

Protein-protein interaction databases

STRINGi359391.BAB1_1255.

Structurei

3D structure databases

ProteinModelPortaliQ2YM03.
SMRiQ2YM03. Positions 4-209.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0087.
HOGENOMiHOG000100368.
KOiK02906.
OMAiSMQDATH.
OrthoDBiEOG6WDSMH.

Family and domain databases

HAMAPiMF_01325_B. Ribosomal_L3_B.
InterProiIPR000597. Ribosomal_L3.
IPR019927. Ribosomal_L3_bac/org-type.
IPR019926. Ribosomal_L3_CS.
IPR009000. Transl_B-barrel.
[Graphical view]
PANTHERiPTHR11229. PTHR11229. 1 hit.
PfamiPF00297. Ribosomal_L3. 1 hit.
[Graphical view]
SUPFAMiSSF50447. SSF50447. 1 hit.
TIGRFAMsiTIGR03625. L3_bact. 1 hit.
PROSITEiPS00474. RIBOSOMAL_L3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2YM03-1 [UniParc]FASTAAdd to Basket

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MRSGVIAQKL GMTRVYNDAG EHVPVTVLRM ENCHVVAQRT VEKNGYTAVQ    50
LGVGMAKVKN TSKAMRGHFA KAEVEPKAKL AEFRVSPDNL LEVGVEITAE 100
HFVAGQKVDV TGTSIGKGFA GVMKRHNFGG HRASHGNSIT HRSHGSTGQR 150
QDPGKVFKGK KMAGHMGQTR VTTQNIEVVS TDSDRGLILV RGAVPGSKGA 200
WILVRDAVKA SLPENAPKPA GLRAGAKAEA AATEGGE 237
Length:237
Mass (Da):25,064
Last modified:February 7, 2006 - v1
Checksum:iC89617EBC6E50AE5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM040264 Genomic DNA. Translation: CAJ11211.1.
RefSeqiYP_414641.1. NC_007618.1.

Genome annotation databases

EnsemblBacteriaiCAJ11211; CAJ11211; BAB1_1255.
GeneIDi3787853.
KEGGibmf:BAB1_1255.
PATRICi17845469. VBIBruMel86222_1304.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM040264 Genomic DNA. Translation: CAJ11211.1 .
RefSeqi YP_414641.1. NC_007618.1.

3D structure databases

ProteinModelPortali Q2YM03.
SMRi Q2YM03. Positions 4-209.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 359391.BAB1_1255.

Proteomic databases

PRIDEi Q2YM03.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAJ11211 ; CAJ11211 ; BAB1_1255 .
GeneIDi 3787853.
KEGGi bmf:BAB1_1255.
PATRICi 17845469. VBIBruMel86222_1304.

Phylogenomic databases

eggNOGi COG0087.
HOGENOMi HOG000100368.
KOi K02906.
OMAi SMQDATH.
OrthoDBi EOG6WDSMH.

Enzyme and pathway databases

BioCyci BABO359391:GKDV-1277-MONOMER.
BMEL359391:GJOQ-1277-MONOMER.

Family and domain databases

HAMAPi MF_01325_B. Ribosomal_L3_B.
InterProi IPR000597. Ribosomal_L3.
IPR019927. Ribosomal_L3_bac/org-type.
IPR019926. Ribosomal_L3_CS.
IPR009000. Transl_B-barrel.
[Graphical view ]
PANTHERi PTHR11229. PTHR11229. 1 hit.
Pfami PF00297. Ribosomal_L3. 1 hit.
[Graphical view ]
SUPFAMi SSF50447. SSF50447. 1 hit.
TIGRFAMsi TIGR03625. L3_bact. 1 hit.
PROSITEi PS00474. RIBOSOMAL_L3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 2308.

Entry informationi

Entry nameiRL3_BRUA2
AccessioniPrimary (citable) accession number: Q2YM03
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: February 7, 2006
Last modified: May 14, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella abortus strain 2308
    Brucella abortus (strain 2308): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi