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Q2YLL7

- RL21_BRUA2

UniProt

Q2YLL7 - RL21_BRUA2

Protein

50S ribosomal protein L21

Gene

rplU

Organism
Brucella abortus (strain 2308)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    This protein binds to 23S rRNA in the presence of protein L20.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciBABO359391:GKDV-1902-MONOMER.
    BMEL359391:GJOQ-1902-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L21UniRule annotation
    Gene namesi
    Name:rplUUniRule annotation
    Ordered Locus Names:BAB1_1858
    OrganismiBrucella abortus (strain 2308)
    Taxonomic identifieri359391 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
    ProteomesiUP000002719: Chromosome I

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 14214250S ribosomal protein L21PRO_0000269290Add
    BLAST

    Proteomic databases

    PRIDEiQ2YLL7.

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit. Contacts protein L20.UniRule annotation

    Protein-protein interaction databases

    STRINGi359391.BAB1_1858.

    Structurei

    3D structure databases

    ProteinModelPortaliQ2YLL7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L21P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0261.
    HOGENOMiHOG000036265.
    KOiK02888.
    OMAiFDSENEY.
    OrthoDBiEOG6TJ84X.

    Family and domain databases

    HAMAPiMF_01363. Ribosomal_L21.
    InterProiIPR028909. L21p-like.
    IPR001787. Ribosomal_L21.
    [Graphical view]
    PfamiPF00829. Ribosomal_L21p. 1 hit.
    [Graphical view]
    SUPFAMiSSF141091. SSF141091. 1 hit.
    TIGRFAMsiTIGR00061. L21. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q2YLL7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MFAVIKTGGK QYRVAANDLI KVEKVAGEAG DIVEFAEVLM VGSTIGAPTV    50
    AGSLVTAEVV EQGRGRKVIA FKKRRRQNSK RTRGHRQELT TIRISEILTD 100
    GAKPSKKAAE KKAPKADAAE GEAAKPKKAA PKKAATKAES AE 142
    Length:142
    Mass (Da):15,067
    Last modified:February 7, 2006 - v1
    Checksum:iB822FA54BF3EE484
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM040264 Genomic DNA. Translation: CAJ11814.1.
    RefSeqiYP_415202.1. NC_007618.1.

    Genome annotation databases

    EnsemblBacteriaiCAJ11814; CAJ11814; BAB1_1858.
    GeneIDi3788924.
    KEGGibmf:BAB1_1858.
    PATRICi17846760. VBIBruMel86222_1929.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM040264 Genomic DNA. Translation: CAJ11814.1 .
    RefSeqi YP_415202.1. NC_007618.1.

    3D structure databases

    ProteinModelPortali Q2YLL7.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 359391.BAB1_1858.

    Proteomic databases

    PRIDEi Q2YLL7.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAJ11814 ; CAJ11814 ; BAB1_1858 .
    GeneIDi 3788924.
    KEGGi bmf:BAB1_1858.
    PATRICi 17846760. VBIBruMel86222_1929.

    Phylogenomic databases

    eggNOGi COG0261.
    HOGENOMi HOG000036265.
    KOi K02888.
    OMAi FDSENEY.
    OrthoDBi EOG6TJ84X.

    Enzyme and pathway databases

    BioCyci BABO359391:GKDV-1902-MONOMER.
    BMEL359391:GJOQ-1902-MONOMER.

    Family and domain databases

    HAMAPi MF_01363. Ribosomal_L21.
    InterProi IPR028909. L21p-like.
    IPR001787. Ribosomal_L21.
    [Graphical view ]
    Pfami PF00829. Ribosomal_L21p. 1 hit.
    [Graphical view ]
    SUPFAMi SSF141091. SSF141091. 1 hit.
    TIGRFAMsi TIGR00061. L21. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 2308.

    Entry informationi

    Entry nameiRL21_BRUA2
    AccessioniPrimary (citable) accession number: Q2YLL7
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 12, 2006
    Last sequence update: February 7, 2006
    Last modified: October 1, 2014
    This is version 51 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Brucella abortus strain 2308
      Brucella abortus (strain 2308): entries and gene names
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3