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Q2YLI4

- ATPD_BRUA2

UniProt

Q2YLI4 - ATPD_BRUA2

Protein

ATP synthase subunit delta

Gene

atpH

Organism
Brucella abortus (strain 2308)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 57 (01 Oct 2014)
      Sequence version 1 (07 Feb 2006)
      Previous versions | rss
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    Functioni

    F1F0 ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F1 containing the extramembraneous catalytic core and F0 containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F1 is coupled via a rotary mechanism of the central stalk subunits to proton translocation.UniRule annotation
    This protein is part of the stalk that links CF0 to CF1. It either transmits conformational changes from CF0 to CF1 or is implicated in proton conduction.UniRule annotation

    GO - Molecular functioni

    1. proton-transporting ATP synthase activity, rotational mechanism Source: UniProtKB-HAMAP

    GO - Biological processi

    1. plasma membrane ATP synthesis coupled proton transport Source: UniProtKB-HAMAP

    Keywords - Biological processi

    ATP synthesis, Hydrogen ion transport, Ion transport, Transport

    Enzyme and pathway databases

    BioCyciBABO359391:GKDV-1854-MONOMER.
    BMEL359391:GJOQ-1854-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    ATP synthase subunit deltaUniRule annotation
    Alternative name(s):
    ATP synthase F(1) sector subunit deltaUniRule annotation
    F-type ATPase subunit deltaUniRule annotation
    Short name:
    F-ATPase subunit deltaUniRule annotation
    Gene namesi
    Name:atpHUniRule annotation
    Ordered Locus Names:BAB1_1810
    OrganismiBrucella abortus (strain 2308)
    Taxonomic identifieri359391 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
    ProteomesiUP000002719: Chromosome I

    Subcellular locationi

    Cell inner membrane UniRule annotation; Peripheral membrane protein UniRule annotation

    GO - Cellular componenti

    1. plasma membrane Source: UniProtKB-SubCell
    2. proton-transporting ATP synthase complex, catalytic core F(1) Source: UniProtKB-KW

    Keywords - Cellular componenti

    Cell inner membrane, Cell membrane, CF(1), Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 186186ATP synthase subunit deltaPRO_0000370909Add
    BLAST

    Proteomic databases

    PRIDEiQ2YLI4.

    Interactioni

    Subunit structurei

    F-type ATPases have 2 components, F1 - the catalytic core - and F0 - the membrane proton channel. F1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. F0 has three main subunits: a1, b2 and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F1 is attached to F0 by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.UniRule annotation

    Protein-protein interaction databases

    STRINGi359391.BAB1_1810.

    Structurei

    3D structure databases

    ProteinModelPortaliQ2YLI4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ATPase delta chain family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0712.
    HOGENOMiHOG000075825.
    KOiK02113.
    OMAiVICSVTT.
    OrthoDBiEOG6DNTDK.

    Family and domain databases

    Gene3Di1.10.520.20. 1 hit.
    HAMAPiMF_01416. ATP_synth_delta_bact.
    InterProiIPR020781. ATPase_OSCP/d_CS.
    IPR026015. ATPase_OSCP/delta_N.
    IPR000711. ATPase_OSCP/dsu.
    [Graphical view]
    PANTHERiPTHR11910. PTHR11910. 1 hit.
    PfamiPF00213. OSCP. 1 hit.
    [Graphical view]
    PRINTSiPR00125. ATPASEDELTA.
    SUPFAMiSSF47928. SSF47928. 1 hit.
    TIGRFAMsiTIGR01145. ATP_synt_delta. 1 hit.
    PROSITEiPS00389. ATPASE_DELTA. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q2YLI4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAETSSLISG VAQRYAGSLF EHALDANSVA SVEKDLGRFE ALLSGSEDLR    50
    RLISSPVFSS EDQLHAIGAI ADKAGIKGLV GNFLRVVAQN RRLFALPGII 100
    AAFRQIAAEH RGEISADVVS AHELTSAQQN ELKATLKGVA GKDVTINVTV 150
    DPSILGGLIV KMGSRQIDTS LRTKLSSLKL ALKEVG 186
    Length:186
    Mass (Da):19,648
    Last modified:February 7, 2006 - v1
    Checksum:iDA7DD5340AAAAF41
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM040264 Genomic DNA. Translation: CAJ11766.1.
    RefSeqiYP_415156.1. NC_007618.1.

    Genome annotation databases

    EnsemblBacteriaiCAJ11766; CAJ11766; BAB1_1810.
    GeneIDi3788633.
    KEGGibmf:BAB1_1810.
    PATRICi17846654. VBIBruMel86222_1876.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM040264 Genomic DNA. Translation: CAJ11766.1 .
    RefSeqi YP_415156.1. NC_007618.1.

    3D structure databases

    ProteinModelPortali Q2YLI4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 359391.BAB1_1810.

    Proteomic databases

    PRIDEi Q2YLI4.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAJ11766 ; CAJ11766 ; BAB1_1810 .
    GeneIDi 3788633.
    KEGGi bmf:BAB1_1810.
    PATRICi 17846654. VBIBruMel86222_1876.

    Phylogenomic databases

    eggNOGi COG0712.
    HOGENOMi HOG000075825.
    KOi K02113.
    OMAi VICSVTT.
    OrthoDBi EOG6DNTDK.

    Enzyme and pathway databases

    BioCyci BABO359391:GKDV-1854-MONOMER.
    BMEL359391:GJOQ-1854-MONOMER.

    Family and domain databases

    Gene3Di 1.10.520.20. 1 hit.
    HAMAPi MF_01416. ATP_synth_delta_bact.
    InterProi IPR020781. ATPase_OSCP/d_CS.
    IPR026015. ATPase_OSCP/delta_N.
    IPR000711. ATPase_OSCP/dsu.
    [Graphical view ]
    PANTHERi PTHR11910. PTHR11910. 1 hit.
    Pfami PF00213. OSCP. 1 hit.
    [Graphical view ]
    PRINTSi PR00125. ATPASEDELTA.
    SUPFAMi SSF47928. SSF47928. 1 hit.
    TIGRFAMsi TIGR01145. ATP_synt_delta. 1 hit.
    PROSITEi PS00389. ATPASE_DELTA. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 2308.

    Entry informationi

    Entry nameiATPD_BRUA2
    AccessioniPrimary (citable) accession number: Q2YLI4
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 5, 2009
    Last sequence update: February 7, 2006
    Last modified: October 1, 2014
    This is version 57 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Brucella abortus strain 2308
      Brucella abortus (strain 2308): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3