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Q2YLI4 (ATPD_BRUA2) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
ATP synthase subunit delta
Alternative name(s):
ATP synthase F(1) sector subunit delta
F-type ATPase subunit delta
Short name=F-ATPase subunit delta
Gene names
Name:atpH
Ordered Locus Names:BAB1_1810
OrganismBrucella abortus (strain 2308) [Complete proteome] [HAMAP]
Taxonomic identifier359391 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella

Protein attributes

Sequence length186 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

F1F0 ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F1 containing the extramembraneous catalytic core and F0 containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F1 is coupled via a rotary mechanism of the central stalk subunits to proton translocation By similarity. HAMAP-Rule MF_01416

This protein is part of the stalk that links CF0 to CF1. It either transmits conformational changes from CF0 to CF1 or is implicated in proton conduction By similarity. HAMAP-Rule MF_01416

Subunit structure

F-type ATPases have 2 components, F1 - the catalytic core - and F0 - the membrane proton channel. F1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. F0 has three main subunits: a1, b2 and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F1 is attached to F0 by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains By similarity.

Subcellular location

Cell inner membrane; Peripheral membrane protein By similarity HAMAP-Rule MF_01416.

Sequence similarities

Belongs to the ATPase delta chain family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 186186ATP synthase subunit delta HAMAP-Rule MF_01416
PRO_0000370909

Sequences

Sequence LengthMass (Da)Tools
Q2YLI4 [UniParc].

Last modified February 7, 2006. Version 1.
Checksum: DA7DD5340AAAAF41

FASTA18619,648
        10         20         30         40         50         60 
MAETSSLISG VAQRYAGSLF EHALDANSVA SVEKDLGRFE ALLSGSEDLR RLISSPVFSS 

        70         80         90        100        110        120 
EDQLHAIGAI ADKAGIKGLV GNFLRVVAQN RRLFALPGII AAFRQIAAEH RGEISADVVS 

       130        140        150        160        170        180 
AHELTSAQQN ELKATLKGVA GKDVTINVTV DPSILGGLIV KMGSRQIDTS LRTKLSSLKL 


ALKEVG 

« Hide

References

[1]"Whole-genome analyses of speciation events in pathogenic Brucellae."
Chain P.S., Comerci D.J., Tolmasky M.E., Larimer F.W., Malfatti S.A., Vergez L.M., Aguero F., Land M.L., Ugalde R.A., Garcia E.
Infect. Immun. 73:8353-8361(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 2308.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM040264 Genomic DNA. Translation: CAJ11766.1.
RefSeqYP_415156.1. NC_007618.1.

3D structure databases

ProteinModelPortalQ2YLI4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING359391.BAB1_1810.

Proteomic databases

PRIDEQ2YLI4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAJ11766; CAJ11766; BAB1_1810.
GeneID3788633.
KEGGbmf:BAB1_1810.
PATRIC17846654. VBIBruMel86222_1876.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0712.
HOGENOMHOG000075825.
KOK02113.
OMAAEVTSAH.
OrthoDBEOG6DNTDK.
ProtClustDBPRK05758.

Enzyme and pathway databases

BioCycBABO359391:GKDV-1854-MONOMER.
BMEL359391:GJOQ-1854-MONOMER.

Family and domain databases

Gene3D1.10.520.20. 1 hit.
HAMAPMF_01416. ATP_synth_delta_bact.
InterProIPR000711. ATPase_F1-cplx_OSCP/dsu.
IPR020781. ATPase_F1-cplx_OSCP/dsu_CS.
IPR026015. ATPase_OSCP/delta_N.
[Graphical view]
PANTHERPTHR11910. PTHR11910. 1 hit.
PfamPF00213. OSCP. 1 hit.
[Graphical view]
PRINTSPR00125. ATPASEDELTA.
SUPFAMSSF47928. SSF47928. 1 hit.
TIGRFAMsTIGR01145. ATP_synt_delta. 1 hit.
PROSITEPS00389. ATPASE_DELTA. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameATPD_BRUA2
AccessionPrimary (citable) accession number: Q2YLI4
Entry history
Integrated into UniProtKB/Swiss-Prot: May 5, 2009
Last sequence update: February 7, 2006
Last modified: April 16, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Brucella abortus strain 2308

Brucella abortus (strain 2308): entries and gene names