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Protein
Submitted name:

AP endonuclease, family 2

Gene

BAB2_0144

Organism
Brucella abortus (strain 2308)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi142ManganeseCombined sources1
Metal bindingi177ManganeseCombined sources1
Metal bindingi203ManganeseCombined sources1
Metal bindingi239ManganeseCombined sources1

GO - Molecular functioni

Keywordsi

Molecular functionEndonucleaseImported, Hydrolase, IsomeraseUniRule annotationImported, Nuclease
LigandManganeseCombined sources, Metal-bindingCombined sources

Names & Taxonomyi

Protein namesi
Submitted name:
AP endonuclease, family 2Imported (EC:5.3.1.22Imported)
Gene namesi
Ordered Locus Names:BAB2_0144Imported
OrganismiBrucella abortus (strain 2308)Imported
Taxonomic identifieri359391 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
Proteomesi
  • UP000002719 Componenti: Chromosome II

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3NGFX-ray1.80A/B1-261[»]
ProteinModelPortaliQ2YLA2.
SMRiQ2YLA2.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ2YLA2.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 218AP_endonuc_2InterPro annotationAdd BLAST198

Sequence similaritiesi

Belongs to the hyi family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000218197.
KOiK01816.
OMAiCEYRPRA.

Family and domain databases

InterProiView protein in InterPro
IPR026040. HyI-like.
IPR013022. Xyl_isomerase-like_TIM-brl.
PfamiView protein in Pfam
PF01261. AP_endonuc_2. 1 hit.
PIRSFiPIRSF006241. HyI. 1 hit.
SUPFAMiSSF51658. SSF51658. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2YLA2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPRFAANLST MFNEVPFLER FRLAAEAGFG GVEFLFPYDF DADVIARELK
60 70 80 90 100
QHNLTQVLFN MPPGDWAAGE RGMAAISGRE QEFRDNVDIA LHYALALDCR
110 120 130 140 150
TLHAMSGITE GLDRKACEET FIENFRYAAD KLAPHGITVL VEPLNTRNMP
160 170 180 190 200
GYFIVHQLEA VGLVKRVNRP NVAVQLDLYH AQIMDGDLTR LIEKMNGAFS
210 220 230 240 250
HVQIASVPDR HEPDEGELNY PYLFSVLESV GYRGWVGCEY NPRGKTESGL
260
AWFAPYRDQS A
Length:261
Mass (Da):29,404
Last modified:February 7, 2006 - v1
Checksum:iF5FF5BCE3EC335A7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM040265 Genomic DNA. Translation: CAJ12310.1.
RefSeqiWP_002966434.1. NZ_KN046823.1.

Genome annotation databases

EnsemblBacteriaiCAJ12310; CAJ12310; BAB2_0144.
GeneIDi29595186.
KEGGibmf:BAB2_0144.
PATRICifig|359391.11.peg.2090.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ2YLA2_BRUA2
AccessioniPrimary (citable) accession number: Q2YLA2
Entry historyiIntegrated into UniProtKB/TrEMBL: February 7, 2006
Last sequence update: February 7, 2006
Last modified: July 5, 2017
This is version 75 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported