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Protein

Ribosome production factor 2 homolog

Gene

RPF2

Organism
Bos taurus (Bovine)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosome production factor 2 homolog
Alternative name(s):
Brix domain-containing protein 1
Ribosome biogenesis protein RPF2 homolog
Gene namesi
Name:RPF2
Synonyms:BXDC1
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Unplaced

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 306306Ribosome production factor 2 homologPRO_0000269722Add
BLAST

Proteomic databases

PaxDbiQ2YDN6.
PRIDEiQ2YDN6.

Interactioni

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000022060.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini31 – 234204BrixPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the RPF2 family.Curated
Contains 1 Brix domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG3031. Eukaryota.
COG5106. LUCA.
HOGENOMiHOG000157782.
HOVERGENiHBG050749.
InParanoidiQ2YDN6.
KOiK14847.

Family and domain databases

InterProiIPR007109. Brix.
[Graphical view]
PfamiPF04427. Brix. 1 hit.
[Graphical view]
SMARTiSM00879. Brix. 1 hit.
[Graphical view]
PROSITEiPS50833. BRIX. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2YDN6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDALDRVVKP KTKRAKRFLE KREPKLSENI KNAMLIKGGN ANSTVTQVLR
60 70 80 90 100
DVYALKKPYG ILYKKKNITR PFEDQTSLEF FSKKSDCSLF MFGSHNKKRP
110 120 130 140 150
NNLVIGRMYD YHVLDIIELG IEKFVSLKDI KNSKCPEGTK PMLIFAGDDF
160 170 180 190 200
DVTEDYRRLK SLLIDFFRGP TVSNIRLAGL EYVLHFTALN GKIYFRSYKL
210 220 230 240 250
LLKKSGCRTP RIELEEMGPS LDLVLRRTHL ASDDLYKLSM KMPKALKPKK
260 270 280 290 300
KKNISHDTFG TTYGRIHMQK QDLSKLQTRK MKGLKKRPAE RKAEDEENKS

KRIKKN
Length:306
Mass (Da):35,543
Last modified:December 20, 2005 - v1
Checksum:i54B0E2EA8147BC26
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC110138 mRNA. Translation: AAI10139.1.
RefSeqiNP_001039548.1. NM_001046083.2.
UniGeneiBt.47903.

Genome annotation databases

GeneIDi511294.
KEGGibta:511294.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC110138 mRNA. Translation: AAI10139.1.
RefSeqiNP_001039548.1. NM_001046083.2.
UniGeneiBt.47903.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000022060.

Proteomic databases

PaxDbiQ2YDN6.
PRIDEiQ2YDN6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi511294.
KEGGibta:511294.

Organism-specific databases

CTDi84154.

Phylogenomic databases

eggNOGiKOG3031. Eukaryota.
COG5106. LUCA.
HOGENOMiHOG000157782.
HOVERGENiHBG050749.
InParanoidiQ2YDN6.
KOiK14847.

Family and domain databases

InterProiIPR007109. Brix.
[Graphical view]
PfamiPF04427. Brix. 1 hit.
[Graphical view]
SMARTiSM00879. Brix. 1 hit.
[Graphical view]
PROSITEiPS50833. BRIX. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRPF2_BOVIN
AccessioniPrimary (citable) accession number: Q2YDN6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 9, 2007
Last sequence update: December 20, 2005
Last modified: June 8, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.