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Protein

High mobility group nucleosome-binding domain-containing protein 4

Gene

HMGN4

Organism
Bos taurus (Bovine)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionDNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
High mobility group nucleosome-binding domain-containing protein 4
Gene namesi
Name:HMGN4
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 23

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002325941 – 90High mobility group nucleosome-binding domain-containing protein 4Add BLAST90

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei80PhosphoserineBy similarity1
Modified residuei82N6-acetyllysineBy similarity1

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

PaxDbiQ2YDK4.
PRIDEiQ2YDK4.

Expressioni

Gene expression databases

BgeeiENSBTAG00000031747.

Interactioni

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000042444.

Family & Domainsi

Sequence similaritiesi

Belongs to the HMGN family.Curated

Phylogenomic databases

eggNOGiENOG410J1B8. Eukaryota.
ENOG410Z0UC. LUCA.
GeneTreeiENSGT00730000110660.
HOGENOMiHOG000116395.
HOVERGENiHBG073479.
InParanoidiQ2YDK4.
KOiK11302.
OMAiNRDATTV.
OrthoDBiEOG091G1ALI.

Family and domain databases

InterProiView protein in InterPro
IPR000079. HMGN_fam.
PfamiView protein in Pfam
PF01101. HMG14_17. 1 hit.
PRINTSiPR00925. NONHISHMG17.
SMARTiView protein in SMART
SM00527. HMG17. 1 hit.
PROSITEiView protein in PROSITE
PS00355. HMG14_17. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2YDK4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPKRKAKGDA KGDKGKVKDE PQRRSARLSA KPALPKPEPR PKKAPAKKGE
60 70 80 90
KLAKGRKGKA EVSKDGNNPA KNRDASTVQS QKAEGTGDAK
Length:90
Mass (Da):9,583
Last modified:January 23, 2007 - v3
Checksum:i1EDF8CF820F7183C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC110182 mRNA. Translation: AAI10183.1.
RefSeqiNP_001040012.1. NM_001046547.1.
UniGeneiBt.28693.

Genome annotation databases

EnsembliENSBTAT00000045015; ENSBTAP00000042444; ENSBTAG00000031747.
GeneIDi614918.
KEGGibta:614918.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC110182 mRNA. Translation: AAI10183.1.
RefSeqiNP_001040012.1. NM_001046547.1.
UniGeneiBt.28693.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000042444.

Proteomic databases

PaxDbiQ2YDK4.
PRIDEiQ2YDK4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSBTAT00000045015; ENSBTAP00000042444; ENSBTAG00000031747.
GeneIDi614918.
KEGGibta:614918.

Organism-specific databases

CTDi10473.

Phylogenomic databases

eggNOGiENOG410J1B8. Eukaryota.
ENOG410Z0UC. LUCA.
GeneTreeiENSGT00730000110660.
HOGENOMiHOG000116395.
HOVERGENiHBG073479.
InParanoidiQ2YDK4.
KOiK11302.
OMAiNRDATTV.
OrthoDBiEOG091G1ALI.

Gene expression databases

BgeeiENSBTAG00000031747.

Family and domain databases

InterProiView protein in InterPro
IPR000079. HMGN_fam.
PfamiView protein in Pfam
PF01101. HMG14_17. 1 hit.
PRINTSiPR00925. NONHISHMG17.
SMARTiView protein in SMART
SM00527. HMG17. 1 hit.
PROSITEiView protein in PROSITE
PS00355. HMG14_17. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiHMGN4_BOVIN
AccessioniPrimary (citable) accession number: Q2YDK4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 18, 2006
Last sequence update: January 23, 2007
Last modified: March 15, 2017
This is version 66 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.