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Q2YD82

- Q2YD82_HUMAN

UniProt

Q2YD82 - Q2YD82_HUMAN

Protein
Submitted name:

TRA@ protein

Gene

TRA@

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 46 (01 Oct 2014)
      Sequence version 1 (20 Dec 2005)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    TRA@ proteinImported
    Gene namesi
    Name:TRA@Imported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

    PTM / Processingi

    Proteomic databases

    PaxDbiQ2YD82.
    PRIDEiQ2YD82.

    Interactioni

    Protein-protein interaction databases

    STRINGi9606.ENSP00000374979.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4OZFX-ray2.70G1-194[»]
    4OZGX-ray3.00E/G1-194[»]
    4OZHX-ray2.80E/G1-194[»]
    4OZIX-ray3.20E/G55-194[»]
    ProteinModelPortaliQ2YD82.
    SMRiQ2YD82. Positions 1-190.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG45691.
    HOVERGENiHBG017898.

    Family and domain databases

    Gene3Di2.60.40.10. 2 hits.
    InterProiIPR015370. DUF1968.
    IPR007110. Ig-like_dom.
    IPR013783. Ig-like_fold.
    IPR003599. Ig_sub.
    IPR013106. Ig_V-set.
    [Graphical view]
    PfamiPF09291. DUF1968. 1 hit.
    PF07686. V-set. 1 hit.
    [Graphical view]
    SMARTiSM00409. IG. 1 hit.
    [Graphical view]
    PROSITEiPS50835. IG_LIKE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q2YD82-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDCAEGRAAN LPCNHSTISG NEYVYWYRQI HSQGPQYIIH GLKNNETNEM    50
    ASLIITEDRK SSTLILPHAT LRDTAVYYCI VYDYGQNFVF GPGTRLSVLP 100
    YIQNPDPAVY QLRDSKSSDK SVCLFTDFDS QTNVSQSKDS DVYITDKTVL 150
    DMRSMDFKSN SAVAWSNKSD FACANAFNNS IIPEDTFFPS PESSCDVKLV 200
    EKSFETDTNL NFQNLSVIGF RILLLKVAGF NLLMTLRLWS S 241
    Length:241
    Mass (Da):27,176
    Last modified:December 20, 2005 - v1
    Checksum:iD122365619DCE1D7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC110354 mRNA. Translation: AAI10355.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC110354 mRNA. Translation: AAI10355.1 .

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4OZF X-ray 2.70 G 1-194 [» ]
    4OZG X-ray 3.00 E/G 1-194 [» ]
    4OZH X-ray 2.80 E/G 1-194 [» ]
    4OZI X-ray 3.20 E/G 55-194 [» ]
    ProteinModelPortali Q2YD82.
    SMRi Q2YD82. Positions 1-190.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 9606.ENSP00000374979.

    Proteomic databases

    PaxDbi Q2YD82.
    PRIDEi Q2YD82.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Phylogenomic databases

    eggNOGi NOG45691.
    HOVERGENi HBG017898.

    Miscellaneous databases

    ChiTaRSi TRA@. human.

    Family and domain databases

    Gene3Di 2.60.40.10. 2 hits.
    InterProi IPR015370. DUF1968.
    IPR007110. Ig-like_dom.
    IPR013783. Ig-like_fold.
    IPR003599. Ig_sub.
    IPR013106. Ig_V-set.
    [Graphical view ]
    Pfami PF09291. DUF1968. 1 hit.
    PF07686. V-set. 1 hit.
    [Graphical view ]
    SMARTi SM00409. IG. 1 hit.
    [Graphical view ]
    PROSITEi PS50835. IG_LIKE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: PancreasImported.
    2. "D2 protein complex."
      Petersen J., Reid H.H., Rossjohn J.
      Submitted (FEB-2014) to the PDB data bank
      Cited for: X-RAY CRYSTALLOGRAPHY (3.00 ANGSTROMS) OF 1-194.
    3. "JR5.1 protein complex."
      Petersen J., Reid H.H., Rossjohn J.
      Submitted (FEB-2014) to the PDB data bank
      Cited for: X-RAY CRYSTALLOGRAPHY (2.70 ANGSTROMS) OF 1-194.
    4. "S16 protein complex."
      Petersen J., Reid H.H., Rossjohn J.
      Submitted (FEB-2014) to the PDB data bank
      Cited for: X-RAY CRYSTALLOGRAPHY (2.80 ANGSTROMS) OF 1-194.
    5. "S2 protein complex."
      Petersen J., Reid H.H., Rossjohn J.
      Submitted (FEB-2014) to the PDB data bank
      Cited for: X-RAY CRYSTALLOGRAPHY (3.20 ANGSTROMS) OF 55-194.

    Entry informationi

    Entry nameiQ2YD82_HUMAN
    AccessioniPrimary (citable) accession number: Q2YD82
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 20, 2005
    Last sequence update: December 20, 2005
    Last modified: October 1, 2014
    This is version 46 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3