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Protein
Submitted name:

TRA@ protein

Gene

TRA@

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
TRA@ proteinImported
Gene namesi
Name:TRA@Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

PaxDbiQ2YD82.
PRIDEiQ2YD82.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000374979.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4OZFX-ray2.70G1-194[»]
4OZGX-ray3.00E/G1-194[»]
4OZHX-ray2.80E/G1-194[»]
4OZIX-ray3.20E/G55-194[»]
ProteinModelPortaliQ2YD82.
SMRiQ2YD82. Positions 1-190.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG45691.
HOVERGENiHBG017898.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
InterProiIPR015370. DUF1968.
IPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003599. Ig_sub.
IPR013106. Ig_V-set.
[Graphical view]
PfamiPF09291. DUF1968. 1 hit.
PF07686. V-set. 1 hit.
[Graphical view]
SMARTiSM00409. IG. 1 hit.
[Graphical view]
PROSITEiPS50835. IG_LIKE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2YD82-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDCAEGRAAN LPCNHSTISG NEYVYWYRQI HSQGPQYIIH GLKNNETNEM
60 70 80 90 100
ASLIITEDRK SSTLILPHAT LRDTAVYYCI VYDYGQNFVF GPGTRLSVLP
110 120 130 140 150
YIQNPDPAVY QLRDSKSSDK SVCLFTDFDS QTNVSQSKDS DVYITDKTVL
160 170 180 190 200
DMRSMDFKSN SAVAWSNKSD FACANAFNNS IIPEDTFFPS PESSCDVKLV
210 220 230 240
EKSFETDTNL NFQNLSVIGF RILLLKVAGF NLLMTLRLWS S
Length:241
Mass (Da):27,176
Last modified:December 20, 2005 - v1
Checksum:iD122365619DCE1D7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC110354 mRNA. Translation: AAI10355.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC110354 mRNA. Translation: AAI10355.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4OZFX-ray2.70G1-194[»]
4OZGX-ray3.00E/G1-194[»]
4OZHX-ray2.80E/G1-194[»]
4OZIX-ray3.20E/G55-194[»]
ProteinModelPortaliQ2YD82.
SMRiQ2YD82. Positions 1-190.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000374979.

Proteomic databases

PaxDbiQ2YD82.
PRIDEiQ2YD82.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiNOG45691.
HOVERGENiHBG017898.

Miscellaneous databases

ChiTaRSiTRA@. human.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
InterProiIPR015370. DUF1968.
IPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003599. Ig_sub.
IPR013106. Ig_V-set.
[Graphical view]
PfamiPF09291. DUF1968. 1 hit.
PF07686. V-set. 1 hit.
[Graphical view]
SMARTiSM00409. IG. 1 hit.
[Graphical view]
PROSITEiPS50835. IG_LIKE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: PancreasImported.
  2. "D2 protein complex."
    Petersen J., Reid H.H., Rossjohn J.
    Submitted (FEB-2014) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (3.00 ANGSTROMS) OF 1-194, ACTIVE SITE.
  3. "JR5.1 protein complex."
    Petersen J., Reid H.H., Rossjohn J.
    Submitted (FEB-2014) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.70 ANGSTROMS) OF 1-194, ACTIVE SITE.
  4. "S16 protein complex."
    Petersen J., Reid H.H., Rossjohn J.
    Submitted (FEB-2014) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.80 ANGSTROMS) OF 1-194, ACTIVE SITE.
  5. "S2 protein complex."
    Petersen J., Reid H.H., Rossjohn J.
    Submitted (FEB-2014) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (3.20 ANGSTROMS) OF 55-194, ACTIVE SITE.

Entry informationi

Entry nameiQ2YD82_HUMAN
AccessioniPrimary (citable) accession number: Q2YD82
Entry historyi
Integrated into UniProtKB/TrEMBL: December 20, 2005
Last sequence update: December 20, 2005
Last modified: January 7, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.