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Protein
Submitted name:

ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module

Gene

Nmul_A1177

Organism
Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849 / C 71)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciNMUL323848:G1GTI-1237-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase moduleImported
Submitted name:
ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase moduleImported
Gene namesi
Ordered Locus Names:Nmul_A1177Imported
ORF Names:SAMN05216403_108107Imported
OrganismiNitrosospira multiformis (strain ATCC 25196 / NCIMB 11849 / C 71)Imported
Taxonomic identifieri323848 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNitrosomonadalesNitrosomonadaceaeNitrosospira
Proteomesi
  • UP000236751 Componenti: Unassembled WGS sequence
  • UP000002718 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi323848.Nmul_A1177

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini329 – 435DNA_LIGASE_A3InterPro annotationAdd BLAST107

Phylogenomic databases

eggNOGiENOG4105DQE Bacteria
COG1793 LUCA
COG3285 LUCA
HOGENOMiHOG000222509
KOiK01971
OMAiAMMVEDH
OrthoDBiPOG091H0AZ9

Family and domain databases

CDDicd04862 PaeLigD_Pol_like, 1 hit
InterProiView protein in InterPro
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR014146 LigD_ligase_dom
IPR014144 LigD_PE_domain
IPR014145 LigD_pol_dom
IPR012340 NA-bd_OB-fold
IPR014143 NHEJ_ligase_prk
IPR033651 PaeLigD_Pol-like
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF13298 LigD_N, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR02777 LigD_PE_dom, 1 hit
TIGR02778 ligD_pol, 1 hit
TIGR02779 NHEJ_ligase_lig, 1 hit
TIGR02776 NHEJ_ligase_prk, 1 hit
PROSITEiView protein in PROSITE
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

Q2Y9U1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTNDDSLKTY RAKRDFSVTP EPSGVASGKT AIKSTAKVLS FVVQKHWATR
60 70 80 90 100
LHYDFRLELE GTMKSWAVPK GPSFDPNDKR MAVHVEDHPI SYNSFEGEIP
110 120 130 140 150
SGQYGAGKVI IWDKGTWIPL EDPHKGYRDG KLKFELRGLK LKGHWALVRM
160 170 180 190 200
RKEENKKQEP WLLIKEKDEY VRSSREYSVV DEMPDSVAEL DVPDVPQPSK
210 220 230 240 250
ASATSGSSSP KSSSIFRKGT KTTLPDNARK AELPRTLTPE LATLVDEPPV
260 270 280 290 300
DPEEWIYEIK FDGYRMLSRI EGGEVRLITR NGNDWSHKLP HLIKALGKLK
310 320 330 340 350
LKSSWLDGEI AVLDENGIPD FQSLQNAFDS AHTESIIYYL FDVPFYEGYD
360 370 380 390 400
LRDASLVERR ALLQKLFEAH APDEIRFSDV FDVSPAEILD SACRLGLEGV
410 420 430 440 450
IGKRKTSVYV SRRSQDWIKL KCKNRQEFVI GGYTDPKGTR KGIGSLLLGY
460 470 480 490 500
YDEDRKLRYA GNVGAGFSDK TLEDLRARLD RIALTDSPFV KANGLDKNAH
510 520 530 540 550
WVEPRLIAEV SFGEWTRGGH IRHSVFHGLR SDKKADVIVR EKPVHPAAKS
560 570 580 590 600
APASAIPKSL KVTNPDRVID PSTGFTKVDL IRYYALVAPL MLPHLARRPV
610 620 630 640 650
SLVRAPEGVS GELFFQKHWE KENMPGIEQL DPSLDPDHPP LLEVSTAEGL
660 670 680 690 700
LSAVQMNVIE FHTWNATKNV IGKPDRIAFD LDPGSGVEWA LIQESAQLVN
710 720 730 740 750
VFLRELGLKS FLKTSGGKGL HIVVPIRRLR DWDTVKGFSQ AIVQHLAKTI
760 770 780 790 800
PTRFTAKSGP RNRVGKIFID YLRNGFGATT VSAWSVRARP GLGVSVPLAW
810 820 830 840 850
EELSSLKSST RWSASNIHER LDKGNDPWAD YAETNQSIVP AMKKLGFTPS

SKA
Length:853
Mass (Da):95,584
Last modified:December 20, 2005 - v1
Checksum:i7D1F25562A37F1EE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000103 Genomic DNA Translation: ABB74480.1
FNVK01000008 Genomic DNA Translation: SEF77140.1
RefSeqiWP_011380521.1, NZ_FNVK01000008.1

Genome annotation databases

EnsemblBacteriaiABB74480; ABB74480; Nmul_A1177
KEGGinmu:Nmul_A1177

Similar proteinsi

Entry informationi

Entry nameiQ2Y9U1_NITMU
AccessioniPrimary (citable) accession number: Q2Y9U1
Entry historyiIntegrated into UniProtKB/TrEMBL: December 20, 2005
Last sequence update: December 20, 2005
Last modified: May 23, 2018
This is version 81 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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