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Q2XY08 (Q2XY08_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
CG13350 EMBL ABA86460.1
Gene names
Name:Ctf4 FlyBase FBgn0033890
ORF Names:CG13350 FlyBase FBgn0033890
OrganismDrosophila melanogaster (Fruit fly) EMBL ABA86460.1
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length878 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL ABA86460.1
Non-terminal residue8781 EMBL ABA86460.1

Sequences

Sequence LengthMass (Da)Tools
Q2XY08 [UniParc].

Last modified December 20, 2005. Version 1.
Checksum: F4192B7635E71E3B

FASTA87894,739
        10         20         30         40         50         60 
LRYAHTNGYT GLLYTPRGEF IITCGTDGDI RHWTCISDDD PRSSCLGEFV MCIAHTGTRL 

        70         80         90        100        110        120 
LASTDRNTIH AYTFPEMDSD GILMRFTAPA TCLKVSGGYT AAGSEDTTIK VLKGDTAGNE 

       130        140        150        160        170        180 
TVLEGHTGPI LALDLFAERK LLVSVAGDGQ LKVWNFEEGK ELKTIGGLPK VNSFESASLY 

       190        200        210        220        230        240 
GTPHFEPQSG ELLAYAVDNE IVVLNTANWE VAFKLRDDSV SSNYSCCQFS PNGERLAAGT 

       250        260        270        280        290        300 
TKGEVSIFDV KKRKAVTVEI PPSDCNAITC LAWNLSGEVE VAFCDATGQL GTVFLGDAVD 

       310        320        330        340        350        360 
TGNGDGLVDD QAELLGDDYE FEAGDDVDTA ADDGDGVSLE QLKRKVMNFA DPVDHDDASN 

       370        380        390        400        410        420 
QSLDSSSRTV PAPVAPQIKL FKQQTAFQPS ATPADLEHRY MAWNDVGIVT AHVEPSGDSS 

       430        440        450        460        470        480 
IDVEFHDASI HHALHISNYN QHNLASVSSG ALALASNESS KLVVIALAAA GNKEWSLSLP 

       490        500        510        520        530        540 
DCESAEAVVA TRFLVAVATS SSFLRIFTVM GTQREVLTIP GPVVAIAGHE HSLMVVYHSS 

       550        560        570        580        590        600 
APSQTQQHLA AMLVNINGLS LRQEYLPVPL TPGRQLTWFG YSDTGSPSIA DNMGLLQLYR 

       610        620        630        640        650        660 
RSSNAWFPIC DTMKQSTSVS HNFFVVAVSE KRQIVQAVLC RGTSYPMTNP RPMLQELRMQ 

       670        680        690        700        710        720 
IPLCDVEVEK SELEDALLRS SLMQMDGAEK MQKETAIKLF ALACSSECET RARELIESIA 

       730        740        750        760        770        780 
CTDLLQLAVK YATKRGRIHL SDRLCELLPQ LEAVQEARKQ QTLLGASGIA ATIVLPMTPT 

       790        800        810        820        830        840 
SASQSGPKPK AIELSSAKRG TLKRLVNSPN MFKAAAASAA SRPSTPDITP SPLDTQENIF 

       850        860        870 
GESESEVPMG KATDHRSPLN SVNPFAMKRK LGDTGVIF

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References

[1]"Intragenic Hill-Robertson interference influences selection intensity on synonymous mutations in Drosophila."
Comeron J.M., Guthrie T.B.
Mol. Biol. Evol. 22:2519-2530(2005) [PubMed: 16120803] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Ral1 EMBL ABA86460.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		DQ138854 Genomic DNA. Translation: ABA86460.1.

3D structure databases

ProteinModelPortalQ2XY08.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ2XY08.

Proteomic databases

PRIDEQ2XY08.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

FlyBaseFBgn0033890. Ctf4.

Phylogenomic databases

eggNOGinNOG05468.
InParanoidQ2XY08.
OrthoDBEOG4BNZSR.

Gene expression databases

ArrayExpressQ2XY08.
BgeeQ2XY08.

Family and domain databases

InterProIPR022100. DUF3639.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR011046. WD40_repeat-like_dom.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
Gene3DG3DSA:2.130.10.10. WD40/YVTN_repeat-like. 1 hit.
PfamPF12341. DUF3639. 1 hit.
PF00400. WD40. 3 hits.
[Graphical view]
SMARTSM00320. WD40. 4 hits.
[Graphical view]
SUPFAMSSF50978. WD40_like. 1 hit.
PROSITEPS00678. WD_REPEATS_1. 1 hit.
PS50082. WD_REPEATS_2. 2 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2XY08_DROME
AccessionPrimary (citable) accession number: Q2XY08
Entry history
Integrated into UniProtKB/TrEMBL: December 20, 2005
Last sequence update: December 20, 2005
Last modified: January 25, 2012
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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