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Protein
Submitted name:

Uncharacterized protein

Gene

C12D8.1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-CEL-450604. KSRP (KHSRP) binds and destabilizes mRNA.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:C12D8.1Imported, CELE_C12D8.1Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiC12D8.1c; CE39222; WBGene00007534.

PTM / Processingi

Proteomic databases

PaxDbiQ2XMZ9.
PeptideAtlasiQ2XMZ9.

Expressioni

Gene expression databases

BgeeiWBGene00007534.
ExpressionAtlasiQ2XMZ9. baseline.

Structurei

3D structure databases

ProteinModelPortaliQ2XMZ9.
SMRiQ2XMZ9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini5 – 76KHInterPro annotationAdd BLAST72
Domaini90 – 162KHInterPro annotationAdd BLAST73
Domaini184 – 255KHInterPro annotationAdd BLAST72
Domaini275 – 346KHInterPro annotationAdd BLAST72

Phylogenomic databases

eggNOGiKOG1676. Eukaryota.
ENOG410XZYE. LUCA.
GeneTreeiENSGT00730000110664.
HOGENOMiHOG000018892.
OrthoDBiEOG091G073X.

Family and domain databases

Gene3Di3.30.1370.10. 4 hits.
InterProiView protein in InterPro
IPR015096. FUBP_C.
IPR004087. KH_dom.
IPR004088. KH_dom_type_1.
PfamiView protein in Pfam
PF09005. DUF1897. 1 hit.
PF00013. KH_1. 4 hits.
SMARTiView protein in SMART
SM00322. KH. 4 hits.
SUPFAMiSSF54791. SSF54791. 4 hits.

Sequencei

Sequence statusi: Complete.

Q2XMZ9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDDNEAVNEK YPIPESAVGI VIGRGGSEIQ GIQAKAGCRV QMSPDADPSS
60 70 80 90 100
GVRMVTLEGS RSNVETAKHL INEVVARSQN PRPQYGFPRA QTTIDIAIPP
110 120 130 140 150
NRCGLIIGKS GDTIRQLQEK SGCKMILVQD NQSVSDQSKP LRITGDPQKI
160 170 180 190 200
ELAKQLVAEI LNSGGDGNGG SGLQMHHAGG GGGASARGEV VVPRSSVGII
210 220 230 240 250
IGKQGDTIKR LAMETGTKIQ FKPDDDPSTP ERCAVIMGTR DQIYRATERI
260 270 280 290 300
TELVKKSTMQ QGGGGNVAGA MVSNEASTFY MSVPAAKCGL VIGKGGETIK
310 320 330 340 350
QINSESGAHC ELSRDPTGNA DEKVFVIKGG KRAIEHAKHL IRIKVGDIAP
360 370 380 390 400
NTPFRDDSAM TMQTQFSAPA QNNFGGQQQW NPVAQIPAAA QNPYQVGGWQ
410 420 430 440 450
QNSVYAQQTA APAAAPYAAA GIVQPQQQVA YQQPQVVQQV QPATTVAATT
460 470 480 490 500
TPTVDPVTGE QDYSAQWMEY YKSIGAHDKA EAVEAQMKKK KAEAAARAVV
510 520 530 540
PGGLIQQMPM GMAMPQMSAQ ARVPTQNYPA YSAAGAAPYQ AQQYGQYQ
Length:548
Mass (Da):58,155
Last modified:December 20, 2005 - v1
Checksum:i9AE053596539023A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAJ43440.1.
RefSeqiNP_001041081.1. NM_001047616.2.
UniGeneiCel.22446.

Genome annotation databases

EnsemblMetazoaiC12D8.1c.1; C12D8.1c.1; WBGene00007534.
C12D8.1c.2; C12D8.1c.2; WBGene00007534.
C12D8.1c.3; C12D8.1c.3; WBGene00007534.
GeneIDi179423.
UCSCiC12D8.1b. c. elegans.

Similar proteinsi

Entry informationi

Entry nameiQ2XMZ9_CAEEL
AccessioniPrimary (citable) accession number: Q2XMZ9
Entry historyiIntegrated into UniProtKB/TrEMBL: December 20, 2005
Last sequence update: December 20, 2005
Last modified: August 30, 2017
This is version 86 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported