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Protein

tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG

Gene

mnmG

Organism
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm5s2U34.UniRule annotation

Cofactori

FADUniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi23 – 286FADUniRule annotation
Nucleotide bindingi282 – 29615NADUniRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

tRNA processing

Keywords - Ligandi

FAD, Flavoprotein, NAD

Enzyme and pathway databases

BioCyciMMAG342108:GJNU-2-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGUniRule annotation
Alternative name(s):
Glucose-inhibited division protein AUniRule annotation
Gene namesi
Name:mnmGUniRule annotation
Synonyms:gidAUniRule annotation
Ordered Locus Names:amb0002
OrganismiMagnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Taxonomic identifieri342108 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesRhodospirillaceaeMagnetospirillum
Proteomesi
  • UP000007058 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 637637tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGPRO_0000345295Add
BLAST

Interactioni

Subunit structurei

Homodimer. Heterotetramer of two MnmE and two MnmG subunits.UniRule annotation

Protein-protein interaction databases

STRINGi342108.amb0002.

Structurei

3D structure databases

ProteinModelPortaliQ2WBG9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MnmG family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107RE5. Bacteria.
COG0445. LUCA.
HOGENOMiHOG000201059.
KOiK03495.
OMAiFRPGYAI.
OrthoDBiEOG6W9X6J.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
HAMAPiMF_00129. MnmG_GidA.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR026904. GidA-assoc_3.
IPR004416. MnmG.
IPR002218. MnmG-rel.
IPR020595. MnmG-rel_CS.
[Graphical view]
PfamiPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
TIGRFAMsiTIGR00136. gidA. 1 hit.
PROSITEiPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2WBG9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLTKYGVFH VKQTSSCDVV VIGAGHAGCE AAAAAARFGA RTVLLTQRLE
60 70 80 90 100
TIGEMSCNPA IGGLAKGQLV REIDAMDGLM GRVIDRAGIQ FRILNRSKGA
110 120 130 140 150
AVQGPRAQAD RKLYRLAMRA ALDETENLSL LEGSAEDLVI TDGRVAGVVL
160 170 180 190 200
ADGSTIACGA VVITTGTFLR GLIHLGEKTW PAGRVGDAPS LGLSLALERA
210 220 230 240 250
GLPLGRLKTG TPARLDGRTI HWDSLDRQEG DDPPVPFSYL TERITTPQVA
260 270 280 290 300
CGITATTPET HAIIRANLER APMYSGQIQS TGPRYCPSIE DKVVRFADRE
310 320 330 340 350
RHQIFLEPEG LDDHTVYPNG ISTSLPEDVQ LAMIATIPGL EQCRVIRPGY
360 370 380 390 400
AIEYDFVDPR ALHRSLETKG VGGLFLAGQI NGTTGYEEAA GQGLMAGLNA
410 420 430 440 450
ARRCAGSAPL VLDRADAYLG VMIDDLVSLG TSEPYRMFTS RAEYRLLLRA
460 470 480 490 500
DNADSRLTPK GREAGCVDSE RWAAFMVKAA GLERGRALLQ SLKGSPDWLR
510 520 530 540 550
RQGLEINRDG VVRSAWDLLA YPELGLQALA AVWPELDSLS GAVAEQLEIE
560 570 580 590 600
GRYAGYLDRQ EADIRAYRRE EGLALSADLD YDAIGSLSNE VRQKLKAARP
610 620 630
ETLAAAARIP GVTPAAVTAL LGHVKKMVLD WAEGPVP
Length:637
Mass (Da):68,495
Last modified:January 10, 2006 - v1
Checksum:i623F5A41AE8826F7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP007255 Genomic DNA. Translation: BAE48806.1.
RefSeqiWP_011382451.1. NC_007626.1.

Genome annotation databases

EnsemblBacteriaiBAE48806; BAE48806; amb0002.
KEGGimag:amb0002.
PATRICi22434260. VBIMagMag129836_0002.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP007255 Genomic DNA. Translation: BAE48806.1.
RefSeqiWP_011382451.1. NC_007626.1.

3D structure databases

ProteinModelPortaliQ2WBG9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi342108.amb0002.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAE48806; BAE48806; amb0002.
KEGGimag:amb0002.
PATRICi22434260. VBIMagMag129836_0002.

Phylogenomic databases

eggNOGiENOG4107RE5. Bacteria.
COG0445. LUCA.
HOGENOMiHOG000201059.
KOiK03495.
OMAiFRPGYAI.
OrthoDBiEOG6W9X6J.

Enzyme and pathway databases

BioCyciMMAG342108:GJNU-2-MONOMER.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
HAMAPiMF_00129. MnmG_GidA.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR026904. GidA-assoc_3.
IPR004416. MnmG.
IPR002218. MnmG-rel.
IPR020595. MnmG-rel_CS.
[Graphical view]
PfamiPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
TIGRFAMsiTIGR00136. gidA. 1 hit.
PROSITEiPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the facultative anaerobic magnetotactic bacterium Magnetospirillum sp. strain AMB-1."
    Matsunaga T., Okamura Y., Fukuda Y., Wahyudi A.T., Murase Y., Takeyama H.
    DNA Res. 12:157-166(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AMB-1 / ATCC 700264.

Entry informationi

Entry nameiMNMG_MAGSA
AccessioniPrimary (citable) accession number: Q2WBG9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 22, 2008
Last sequence update: January 10, 2006
Last modified: January 20, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.