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Q2WAV1 (Q2WAV1_MAGSA) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:amb0220 EMBL BAE49024.1
OrganismMagnetospirillum magneticum (strain AMB-1 / ATCC 700264) [Complete proteome] [HAMAP]
Taxonomic identifier342108 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesRhodospirillaceaeMagnetospirillum

Protein attributes

Sequence length807 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: InterPro

signal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q2WAV1 [UniParc].

Last modified January 10, 2006. Version 1.
Checksum: C62BAE4E26B2535F

FASTA80786,777
        10         20         30         40         50         60 
MFNLNVSGRI YAGFGLIVLL LLVLAGQSIT TLGSSKAQID RYAGVSDNAQ RVLSLKGDFA 

        70         80         90        100        110        120 
NIRRNVIIFA DNADPKALEQ IRKIQPGMAK TLPEAANATV DPTRKANLTK MGELFTGYMA 

       130        140        150        160        170        180 
GFDKVADLRK AKLELVEKRM NVVGVAARKD LSQIMKTAMD DGDYEAAALA GVAQEALLLG 

       190        200        210        220        230        240 
RLNAIKFLAD PSDALVKDAQ TEIEEFVKEA ETLTKRLRNP ERKRLAAEAE TNAKAYRDAF 

       250        260        270        280        290        300 
TQVAAATNAL DKLVFKDMAA LAVQFADLAD QTVHSQDQAM DQQKADTEAG MARSNTATWT 

       310        320        330        340        350        360 
GAIIALGLAV LLSWLIARSI VTPLSAMTGA MTELSKGNKT VDIPARERTD EIGAMAQAME 

       370        380        390        400        410        420 
IFKENTLKMD KMQAEQEAQK VKAEADRKAA LHHMADTFEE SVGKVVQTVT SAATELQGAS 

       430        440        450        460        470        480 
SQMAGTAHET SAQATTVASA ATQASANVET VAAATEELAA SISEIAKQVE RSQAVANRAE 

       490        500        510        520        530        540 
QEAENTTNQV RALSDNVGRI GEVVVLINDI AAQTNLLALN ATIEAARAGD AGKGFAVVAN 

       550        560        570        580        590        600 
EVKNLANQTA KATDEIASQI KAVQEGTGNA VKAIDTISKV ISEMGEISAS VASAVQEQTA 

       610        620        630        640        650        660 
ATGEIARNVE QAAAGTAEVS SNINSVEQAA RETGHAAEQI SESATDLSKQ AEFLRGEVGR 

       670        680        690        700        710        720 
FLHQVRADKA DMRILEWENA LNTGESSIDR HHREMFDQVN RFYGEMMSGN GDAAIQGILG 

       730        740        750        760        770        780 
LVPAAFVPHF KEEEELMTRH AYPGIDEHRR RHREFMDKFE GLKRAVETGK DGANGQLFQF 

       790        800 
VAGWLKDHIR HEDGKIAAFL RDKKIVA 

« Hide

References

[1]"Complete genome sequence of the facultative anaerobic magnetotactic bacterium Magnetospirillum sp. strain AMB-1."
Matsunaga T., Okamura Y., Fukuda Y., Wahyudi A.T., Murase Y., Takeyama H.
DNA Res. 12:157-166(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AMB-1 / ATCC 700264.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP007255 Genomic DNA. Translation: BAE49024.1.
RefSeqYP_419583.1. NC_007626.1.

3D structure databases

ProteinModelPortalQ2WAV1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING342108.amb0220.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAE49024; BAE49024; amb0220.
GeneID3806118.
KEGGmag:amb0220.
PATRIC22434710. VBIMagMag129836_0226.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148079.
OMAHETSAQA.
OrthoDBEOG6C8MTF.

Enzyme and pathway databases

BioCycMMAG342108:GJNU-221-MONOMER.

Family and domain databases

Gene3D1.20.120.50. 1 hit.
InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR012827. Haemerythrin-like_metal-bd.
IPR012312. Haemerythrin/HHE_cat-bd_motif.
IPR016131. Haemerythrin_Fe_BS.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF01814. Hemerythrin. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMSSF47188. SSF47188. 1 hit.
TIGRFAMsTIGR02481. hemeryth_dom. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS00550. HEMERYTHRINS. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2WAV1_MAGSA
AccessionPrimary (citable) accession number: Q2WAV1
Entry history
Integrated into UniProtKB/TrEMBL: January 10, 2006
Last sequence update: January 10, 2006
Last modified: May 14, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)