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Q2W5V6 (Q2W5V6_MAGSA) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:amb1965 EMBL BAE50769.1
OrganismMagnetospirillum magneticum (strain AMB-1 / ATCC 700264) [Complete proteome] [HAMAP]
Taxonomic identifier342108 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesRhodospirillaceaeMagnetospirillum

Protein attributes

Sequence length545 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q2W5V6 [UniParc].

Last modified January 10, 2006. Version 1.
Checksum: EF42379E9A563A39

FASTA54558,562
        10         20         30         40         50         60 
MKEGPMTMNA QRSWWKDLKL RRKFSTVSLG FTLVLAGLIA FNVMVLRNQT QNSLVTDMAG 

        70         80         90        100        110        120 
RQRMLSQKFA KEVLLQSGGM VVDHQVTMRL MRDSLAALME GGEAVINLDT GAKGELPPAP 

       130        140        150        160        170        180 
TLEIRAKLAE QASLLRQYDA AATALLALGA GDSRRADKLK ELLGLQSQLS DTAETVVKML 

       190        200        210        220        230        240 
SFQAEGAIRG MIGLEIIVGL ICALSGLVVS SLIGRQIADP LAACAEAARK IAEGDLRIEP 

       250        260        270        280        290        300 
LEVSSTDEIG VLQQAFDEML RSQRDIALQT RSACDALTAA AAAILSSAQE QAAGTKQQAA 

       310        320        330        340        350        360 
AVQEITTTVE EISLSGKQVA ERSRQVAGTA EAVATSGNAG LHAVRDASQG MEAIREQTET 

       370        380        390        400        410        420 
VAENIITLSE RTQAVGEIIA TVNEIAEQSN LVALNAAIEA ADAREQGRRF SVVAGEIKNL 

       430        440        450        460        470        480 
ADQAKEATSQ VRGILEQTQK GINTSVMLTE EALKRVELGR EKSTMSEHVI RQMADNIQES 

       490        500        510        520        530        540 
VHAFQQIVGA TNQQQIGLEQ VTQALHEIRQ ASQQTAQTTA QLEKASLDLS QLGQTLSRTL 


EKYRL 

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References

[1]"Complete genome sequence of the facultative anaerobic magnetotactic bacterium Magnetospirillum sp. strain AMB-1."
Matsunaga T., Okamura Y., Fukuda Y., Wahyudi A.T., Murase Y., Takeyama H.
DNA Res. 12:157-166(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AMB-1 / ATCC 700264.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP007255 Genomic DNA. Translation: BAE50769.1.
RefSeqYP_421328.1. NC_007626.1.

3D structure databases

ProteinModelPortalQ2W5V6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING342108.amb1965.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAE50769; BAE50769; amb1965.
GeneID3804482.
KEGGmag:amb1965.
PATRIC22438168. VBIMagMag129836_1931.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000077108.
OMAKMEDASE.
OrthoDBEOG6MH582.
ProtClustDBCLSK2397215.

Enzyme and pathway databases

BioCycMMAG342108:GJNU-1988-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2W5V6_MAGSA
AccessionPrimary (citable) accession number: Q2W5V6
Entry history
Integrated into UniProtKB/TrEMBL: January 10, 2006
Last sequence update: January 10, 2006
Last modified: February 19, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)