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Q2W5H6 (Q2W5H6_MAGSA) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 69. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length409 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS001608

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site771Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2971Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1751Substrate By similarity HAMAP-Rule MF_01201
Binding site3451Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue771N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
Q2W5H6 [UniParc].

Last modified January 10, 2006. Version 1.
Checksum: 6BBC9920F79A4B5C

FASTA40942,845
        10         20         30         40         50         60 
MPGWASGNCA ATCAFAEQGL VFPSEERDGA LSPLPGRTMT DLARATALLT IDVAAIVANW 

        70         80         90        100        110        120 
KRLSALVAPA EASAVVKADC YGLGMDRIAP ALFAAGCRSF FVACVNEGIA LRRLLPGAMI 

       130        140        150        160        170        180 
HVLSGPMGGD EAEFAAHGLI PVLNSLSQMT GWASFAKKGS GAPAVAIHID TGMSRLGLSE 

       190        200        210        220        230        240 
PELERLAAKP EILAAMRPIL VMSHLACADD SDSPMNARQL TTLRRLASHL PALPQSIAAS 

       250        260        270        280        290        300 
SGIFLGRGFH LGMVRPGAAL YGLNPMPGRP NPMSQVIKLE GKIVQVRDVD SPQTVGYGAT 

       310        320        330        340        350        360 
HRVEGKRRLA IVAVGYADGW FRSLSNRGHG MIGGVKVPVV GRVSMDLTTF DVTDVPVESA 

       370        380        390        400 
HPGGLIQLIG PGYGPDHLAA EADTIGYEVL TALGRRHLRR WIGTEGAAS 

« Hide

References

[1]"Complete genome sequence of the facultative anaerobic magnetotactic bacterium Magnetospirillum sp. strain AMB-1."
Matsunaga T., Okamura Y., Fukuda Y., Wahyudi A.T., Murase Y., Takeyama H.
DNA Res. 12:157-166(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AMB-1 / ATCC 700264.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP007255 Genomic DNA. Translation: BAE50899.1.
RefSeqYP_421458.1. NC_007626.1.

3D structure databases

ProteinModelPortalQ2W5H6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING342108.amb2095.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAE50899; BAE50899; amb2095.
GeneID3805023.
KEGGmag:amb2095.
PATRIC22438422. VBIMagMag129836_2057.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031445.
KOK01775.
OMARIGISIY.
OrthoDBEOG6PP9NJ.

Enzyme and pathway databases

BioCycMMAG342108:GJNU-2119-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ2W5H6_MAGSA
AccessionPrimary (citable) accession number: Q2W5H6
Entry history
Integrated into UniProtKB/TrEMBL: January 10, 2006
Last sequence update: January 10, 2006
Last modified: July 9, 2014
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)