Q2W5H6 (Q2W5H6_MAGSA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL BAE50899.1

Gene names

Ordered Locus Names:

amb2095

Organism

Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) [Complete proteome] [HAMAP]

Taxonomic identifier

342108 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhodospirillales › Rhodospirillaceae › Magnetospirillum › Magnetospirillum magneticum

Protein attributes

Sequence length	409 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS011079
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS011079
Molecular function	Isomerase SAAS SAAS011079
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2W5H6 [UniParc]. Last modified January 10, 2006. Version 1. Checksum: 6BBC9920F79A4B5C	FASTA	409	42,845
	10 20 30 40 50 60 MPGWASGNCA ATCAFAEQGL VFPSEERDGA LSPLPGRTMT DLARATALLT IDVAAIVANW 70 80 90 100 110 120 KRLSALVAPA EASAVVKADC YGLGMDRIAP ALFAAGCRSF FVACVNEGIA LRRLLPGAMI 130 140 150 160 170 180 HVLSGPMGGD EAEFAAHGLI PVLNSLSQMT GWASFAKKGS GAPAVAIHID TGMSRLGLSE 190 200 210 220 230 240 PELERLAAKP EILAAMRPIL VMSHLACADD SDSPMNARQL TTLRRLASHL PALPQSIAAS 250 260 270 280 290 300 SGIFLGRGFH LGMVRPGAAL YGLNPMPGRP NPMSQVIKLE GKIVQVRDVD SPQTVGYGAT 310 320 330 340 350 360 HRVEGKRRLA IVAVGYADGW FRSLSNRGHG MIGGVKVPVV GRVSMDLTTF DVTDVPVESA 370 380 390 400 HPGGLIQLIG PGYGPDHLAA EADTIGYEVL TALGRRHLRR WIGTEGAAS

References

[1]

"Complete genome sequence of the facultative anaerobic magnetotactic bacterium Magnetospirillum sp. strain AMB-1." Matsunaga T., Okamura Y., Fukuda Y., Wahyudi A.T., Murase Y., Takeyama H. DNA Res. 12:157-166(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AMB-1 / ATCC 700264.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP007255 Genomic DNA. Translation: BAE50899.1.
RefSeq	YP_421458.1. NC_007626.1.
3D structure databases
ProteinModelPortal	Q2W5H6.
ModBase	Search...
Protein-protein interaction databases
STRING	342108.amb2095.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAE50899; BAE50899; amb2095.
GeneID	3805023.
KEGG	mag:amb2095.
PATRIC	22438422. VBIMagMag129836_2057.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0787.
HOGENOM	HOG000031445.
KO	K01775.
OMA	YCTPDKI.
Enzyme and pathway databases
BioCyc	MMAG342108:GJNU-2119-MONOMER.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q2W5H6_MAGSA

Accession

Primary (citable) accession number: Q2W5H6

Entry history

Integrated into UniProtKB/TrEMBL:	January 10, 2006
Last sequence update:	January 10, 2006
Last modified:	May 1, 2013
This is version 60 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)