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Protein

30S ribosomal protein S21

Gene

rpsU

Organism
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciMMAG342108:GJNU-2852-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S21UniRule annotation
Gene namesi
Name:rpsUUniRule annotation
Ordered Locus Names:amb2820
OrganismiMagnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Taxonomic identifieri342108 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesRhodospirillaceaeMagnetospirillum
Proteomesi
  • UP000007058 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 676730S ribosomal protein S21PRO_0000266700Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi342108.amb2820.

Structurei

3D structure databases

ProteinModelPortaliQ2W3F1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S21P family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105K5G. Bacteria.
COG0828. LUCA.
HOGENOMiHOG000157459.
KOiK02970.
OMAiRGYYEKP.
OrthoDBiPOG091H0359.

Family and domain databases

HAMAPiMF_00358. Ribosomal_S21. 1 hit.
InterProiIPR001911. Ribosomal_S21.
IPR018278. Ribosomal_S21_CS.
[Graphical view]
PfamiPF01165. Ribosomal_S21. 1 hit.
[Graphical view]
ProDomiPD005521. Ribosomal_S21. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00030. S21p. 1 hit.
PROSITEiPS01181. RIBOSOMAL_S21. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2W3F1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQVLVRDNNV DQALKALKKK MQREGVFREM KLRRNYEKPS ERRAREKAEA
60
VRRARKLERK RLEREGF
Length:67
Mass (Da):8,228
Last modified:December 12, 2006 - v2
Checksum:i5797D8F71715660F
GO

Sequence cautioni

The sequence BAE51624 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP007255 Genomic DNA. Translation: BAE51624.1. Different initiation.
RefSeqiWP_002726599.1. NC_007626.1.

Genome annotation databases

EnsemblBacteriaiBAE51624; BAE51624; amb2820.
KEGGimag:amb2820.
PATRICi22439896. VBIMagMag129836_2784.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP007255 Genomic DNA. Translation: BAE51624.1. Different initiation.
RefSeqiWP_002726599.1. NC_007626.1.

3D structure databases

ProteinModelPortaliQ2W3F1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi342108.amb2820.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAE51624; BAE51624; amb2820.
KEGGimag:amb2820.
PATRICi22439896. VBIMagMag129836_2784.

Phylogenomic databases

eggNOGiENOG4105K5G. Bacteria.
COG0828. LUCA.
HOGENOMiHOG000157459.
KOiK02970.
OMAiRGYYEKP.
OrthoDBiPOG091H0359.

Enzyme and pathway databases

BioCyciMMAG342108:GJNU-2852-MONOMER.

Family and domain databases

HAMAPiMF_00358. Ribosomal_S21. 1 hit.
InterProiIPR001911. Ribosomal_S21.
IPR018278. Ribosomal_S21_CS.
[Graphical view]
PfamiPF01165. Ribosomal_S21. 1 hit.
[Graphical view]
ProDomiPD005521. Ribosomal_S21. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00030. S21p. 1 hit.
PROSITEiPS01181. RIBOSOMAL_S21. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS21_MAGSA
AccessioniPrimary (citable) accession number: Q2W3F1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: December 12, 2006
Last modified: September 7, 2016
This is version 62 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.