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Q2W2Q6

- GLGB_MAGSA

UniProt

Q2W2Q6 - GLGB_MAGSA

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Protein
1,4-alpha-glucan branching enzyme GlgB
Gene
glgB, amb3065
Organism
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position By similarity.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei419 – 4191Nucleophile By similarity
Active sitei472 – 4721Proton donor By similarity

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciMMAG342108:GJNU-3099-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgB (EC:2.4.1.18)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase
Alpha-(1->4)-glucan branching enzyme
Glycogen branching enzyme
Short name:
BE
Gene namesi
Name:glgB
Ordered Locus Names:amb3065
OrganismiMagnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Taxonomic identifieri342108 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesRhodospirillaceaeMagnetospirillum
ProteomesiUP000007058: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7407401,4-alpha-glucan branching enzyme GlgBUniRule annotation
PRO_0000260664Add
BLAST

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi342108.amb3065.

Structurei

3D structure databases

ProteinModelPortaliQ2W2Q6.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiAKLLFMG.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2W2Q6-1 [UniParc]FASTAAdd to Basket

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MGSSTGRRGL MPEAAKLIRS SDADAIARGR HGDPFAVLGP HAVKGGTVIR    50
TFQPQARTVF VLAADGETEM SRAHPDGLFA VKLKGSPAYR LRAVRHDGGT 100
EELDDPYRFP PVLGDLDVHL LAEGTHLRTF EKLGAQVRIV DGVAGVDFAL 150
WAPNASRVSV VGDFNGWDGR RHPMRLRHEA GMWEIFIPGL GQGAVYKYEI 200
VASDGRLLPL KADPYGHFAE VPPKTASVVW ELGRRDWADA DWMAAQKARN 250
DRHAPISIYE VHLGSWRRVP EDCNRPLSYL EMADQLGDYV ADLGFTHVEF 300
LPIHEHPFGG SWGYQPVGLF APTSRYGTPD EFRTLVDRLH QKGIGVIIDW 350
VAGHFPNDPH GLHHFDGTHL YEHEDPRLGV HKDWNTLIYN YGRSEVVNYL 400
YANALYWLEQ YHVDGLRVDA VASMLYLDYS REPGEWIPNR HGGNENLEAI 450
DFLRRMNMLV YAEHPGAMTI AEESTAWPMV SRPVHLGGLG FGYKWNMGWM 500
HDTLRYFSKD PIHRRYHHDS LTFAQLYAYH ENFVLPLSHD EVVHGKGSIF 550
GRMPGDPWQR FANLRAYYGF MWTQPGKKLL FMGQEFAQQS EWNEDASLDW 600
HLLGDGRNEG VMRLIRDLNR LYRTEPALHQ LDNEPAGFAW IDCNDRDNSV 650
LTWLRKGFDP GDFLVVAGNY TPMVRDSYRI GVPEPGWYRE LLNTDSEWYG 700
GANIHNGGGV HTEEVPWHGH GFSICLRLPP LATCVFKRER 740
Length:740
Mass (Da):84,012
Last modified:January 10, 2006 - v1
Checksum:i447BD20B9AFE3040
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP007255 Genomic DNA. Translation: BAE51869.1.
RefSeqiYP_422428.1. NC_007626.1.

Genome annotation databases

EnsemblBacteriaiBAE51869; BAE51869; amb3065.
GeneIDi3804549.
KEGGimag:amb3065.
PATRICi22440415. VBIMagMag129836_3041.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP007255 Genomic DNA. Translation: BAE51869.1 .
RefSeqi YP_422428.1. NC_007626.1.

3D structure databases

ProteinModelPortali Q2W2Q6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 342108.amb3065.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAE51869 ; BAE51869 ; amb3065 .
GeneIDi 3804549.
KEGGi mag:amb3065.
PATRICi 22440415. VBIMagMag129836_3041.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi AKLLFMG.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci MMAG342108:GJNU-3099-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the facultative anaerobic magnetotactic bacterium Magnetospirillum sp. strain AMB-1."
    Matsunaga T., Okamura Y., Fukuda Y., Wahyudi A.T., Murase Y., Takeyama H.
    DNA Res. 12:157-166(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AMB-1 / ATCC 700264.

Entry informationi

Entry nameiGLGB_MAGSA
AccessioniPrimary (citable) accession number: Q2W2Q6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: January 10, 2006
Last modified: June 11, 2014
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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