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Q2W1B7 (Q2W1B7_MAGSA) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:amb3554 EMBL BAE52358.1
OrganismMagnetospirillum magneticum (strain AMB-1 / ATCC 700264) [Complete proteome] [HAMAP]
Taxonomic identifier342108 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesRhodospirillaceaeMagnetospirillum

Protein attributes

Sequence length986 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functiontransmembrane signaling receptor activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q2W1B7 [UniParc].

Last modified January 10, 2006. Version 1.
Checksum: 64469753AB12F8FC

FASTA986107,266
        10         20         30         40         50         60 
MRVNEPITNH EIELPEGTIL VSKTDLGGRI TFVNQAFIEI SGYTEEELIG APHNLVRHPH 

        70         80         90        100        110        120 
MPPVAFADLW NTIKAGKPWE GIVKNRAKNG DHYWVRANAT PEMEGGQITG YISIRTAPTR 

       130        140        150        160        170        180 
AQVEAAEHLY EQVRSGKARN IKVEEGRVLS TTAAARLGRA LNSISGRLAL IIAIMVMVMG 

       190        200        210        220        230        240 
TVAWFTLDGM ADSNEALKRV YQQRTVPAGQ FVEIIDRMRE NLLLVHQMQI DLNNGQADAI 

       250        260        270        280        290        300 
PRRTLRVRAN AEHISAVWSA YRANPLPAEE AELAGDFETR RKDFVEQGLL VALDLAEKGD 

       310        320        330        340        350        360 
AATLGRHIAT GVQPQFEQVH EVLKDLLSLQ LRQASELYEG ARTDYGHHMR LGIGTLVGGT 

       370        380        390        400        410        420 
LLATLMALVL IRYLRRPIAT LEYHFDAIAR GDFTHEIQAE EVREFQRSSA LLRAMEAKLA 

       430        440        450        460        470        480 
YAVQERAENA RKAQEKLRSE MLNLTELLEG EVDNTVAEIS TQAERLKEGA AHLLATAEEL 

       490        500        510        520        530        540 
RDKSETVARA IEITSGNVQT VAGATEELEA SSREITARIQ SSSEHSEAAR HRVDEASSSV 

       550        560        570        580        590        600 
GTLTEATARI GDVVSLIQAI AGQTRMLALN ATIEAARAGD AGKGFAVVAS EVKGLAEQTE 

       610        620        630        640        650        660 
DAIGRVNAQA RDIESTTQKA VATVEAVADT IRDMEQIAGQ IAASADEQRA ATGEIMSSAV 

       670        680        690        700        710        720 
QAADHTRDVA DAAADVLKAS EQTGVTARKV SELSMLVNHD IGALQRRLNV ILRTSYGGNR 

       730        740        750        760        770        780 
RAVERIPASL EFTATFAGRT FSGHTGDISL MGALLVVGDA PKLEGEIGSI TFPGVGEIPT 

       790        800        810        820        830        840 
KAILGSRLGI QCQYLKVGQD IKQRLSAAIQ AAQANDAPFI ATAQKAAADV ARAFEQAVNA 

       850        860        870        880        890        900 
GRISLAELFE CEYTPVLDTD PQQMLAHHTQ VADQVIPAII EPALASDSRA VFCCVADRNG 

       910        920        930        940        950        960 
YIATHNKIYS QPQRPNDPVW NTANCRNRRM FDDRTGILAA RNTKEYLAQT YARDMGGGNF 

       970        980 
VVLKEIDCPI NVGNRHWGSV RYGIKL 

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References

[1]"Complete genome sequence of the facultative anaerobic magnetotactic bacterium Magnetospirillum sp. strain AMB-1."
Matsunaga T., Okamura Y., Fukuda Y., Wahyudi A.T., Murase Y., Takeyama H.
DNA Res. 12:157-166(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AMB-1 / ATCC 700264.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP007255 Genomic DNA. Translation: BAE52358.1.
RefSeqYP_422917.1. NC_007626.1.

3D structure databases

ProteinModelPortalQ2W1B7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING342108.amb3554.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAE52358; BAE52358; amb3554.
GeneID3805526.
KEGGmag:amb3554.
PATRIC22441450. VBIMagMag129836_3550.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148079.
OrthoDBEOG67HJQK.
ProtClustDBCLSK2772994.

Enzyme and pathway databases

BioCycMMAG342108:GJNU-3597-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF13426. PAS_9. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMSSF55785. SSF55785. 1 hit.
TIGRFAMsTIGR00229. sensory_box. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2W1B7_MAGSA
AccessionPrimary (citable) accession number: Q2W1B7
Entry history
Integrated into UniProtKB/TrEMBL: January 10, 2006
Last sequence update: January 10, 2006
Last modified: February 19, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)