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Q2VZL5 (Q2VZL5_MAGSA) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:amb4156 EMBL BAE52960.1
OrganismMagnetospirillum magneticum (strain AMB-1 / ATCC 700264) [Complete proteome] [HAMAP]
Taxonomic identifier342108 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesRhodospirillaceaeMagnetospirillum

Protein attributes

Sequence length795 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: InterPro

signal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q2VZL5 [UniParc].

Last modified January 10, 2006. Version 1.
Checksum: 02B4D6C403A432A7

FASTA79585,861
        10         20         30         40         50         60 
MRNPLSRFSL KIQIGSLVAL AGLVLSTLLA VDLMEQSIAD RANAIAARET IIGDQAGAVD 

        70         80         90        100        110        120 
RALLNARRHE KDFLLRGEAK YIAQHAESIR AARAALDGMT SAMVTDDVRH PQIDAVRKGL 

       130        140        150        160        170        180 
TTYVDAFRVL TERHILVGLT VNDGLTGALR KSVHEIESAL KSHDDPPLAV AMLTIRRDEK 

       190        200        210        220        230        240 
DFFARLDPKY LDEMAQNYVD FEKALSVSAV PARDRPAILN LLADYRRDFT AAAEASLAMV 

       250        260        270        280        290        300 
GDGTVLASSY ASVQPLIDAL DDEALTAMKV AKERAHQADE TAGRMMLSVM ASGFAIMVVI 

       310        320        330        340        350        360 
GTLIARSIYG PITAMTGVMG ELAGDNLSVT VPFTDRGDEL GGMAKSVGHF KDQLIRVRQL 

       370        380        390        400        410        420 
EAAQEEQKRR AEADRLAAMR KLADTFEGSV GKVIETVTSA ATELEAASGQ MAGTATETSS 

       430        440        450        460        470        480 
QATTVASAAQ QASTNVQTVA SATEELASSI KEIAHQVERS QAVSHHAGDE AHTTTMQVQA 

       490        500        510        520        530        540 
LSANVGKIGE IVKLINDIAS QTNLLALNAT IEAARAGEAG KGFAVVAGEV KDLANQTAKA 

       550        560        570        580        590        600 
TSEIAGQIQA VQDSTRVAVH AIESISKVIA EMGEISSAVA AAVEQQTAAT GEIARNVEQA 

       610        620        630        640        650        660 
AEGTQEVTRN IVSVEQAAKE TGQAAEQIRE SSGELSRQAE FLRHEVGQFL IQVRSEKKDM 

       670        680        690        700        710        720 
VLLHWDRDLE AGVTSIDRYH QEKFEHINEF YRQMMSEDGG KAAIALLSEI DRSIQGHFGE 

       730        740        750        760        770        780 
EEALMAKCGY GDGEAHRRSH KAFQERIRAL RTGIETNHPE AVSQLFDYVS DWFPDHIRNE 

       790 
DMALALFLRD RKMAA 

« Hide

References

[1]"Complete genome sequence of the facultative anaerobic magnetotactic bacterium Magnetospirillum sp. strain AMB-1."
Matsunaga T., Okamura Y., Fukuda Y., Wahyudi A.T., Murase Y., Takeyama H.
DNA Res. 12:157-166(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AMB-1 / ATCC 700264.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP007255 Genomic DNA. Translation: BAE52960.1.
RefSeqYP_423519.1. NC_007626.1.

3D structure databases

ProteinModelPortalQ2VZL5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING342108.amb4156.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAE52960; BAE52960; amb4156.
GeneID3803527.
KEGGmag:amb4156.
PATRIC22442634. VBIMagMag129836_4135.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148079.
KOK03406.
OMAMVSAEID.
OrthoDBEOG62G5MF.

Enzyme and pathway databases

BioCycMMAG342108:GJNU-4206-MONOMER.

Family and domain databases

Gene3D1.20.120.50. 1 hit.
InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR012827. Haemerythrin-like_metal-bd.
IPR012312. Haemerythrin/HHE_cat-bd_motif.
IPR016131. Haemerythrin_Fe_BS.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF01814. Hemerythrin. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMSSF47188. SSF47188. 1 hit.
TIGRFAMsTIGR02481. hemeryth_dom. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS00550. HEMERYTHRINS. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2VZL5_MAGSA
AccessionPrimary (citable) accession number: Q2VZL5
Entry history
Integrated into UniProtKB/TrEMBL: January 10, 2006
Last sequence update: January 10, 2006
Last modified: May 14, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)