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Q2VPM3 (Q2VPM3_XENLA) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
XIRF-6 protein EMBL AAI08594.1
Gene names
Name:xIRF-6 EMBL AAI08594.1
OrganismXenopus laevis (African clawed frog) EMBL AAI08594.1
Taxonomic identifier8355 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Amphibia › Batrachia › Anura › Pipoidea › Pipidae › Xenopodinae › Xenopus › Xenopus

Protein attributes

Sequence length459 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q2VPM3 [UniParc].

Last modified January 10, 2006. Version 1.
Checksum: D8F7BEEEEE8DA51F

FASTA45952,367
        10         20         30         40         50         60 
MAMHPRRVRL KPWLVAQVDS GMYPGLIWLN REAKRFQIPW KHATRHSPRQ EEENTIFKAW 

        70         80         90        100        110        120 
AVETGKYQEG ADEPDPAKWK AQLRCALNKS REFKLMYDGT KEVPMNPVKI YEVCDIPQSQ 

       130        140        150        160        170        180 
GSIINPGSTG SVPWDDDDFE ADELNQSQNH VPISEPFNCL NINDSPIGSS STGSCTPEQT 

       190        200        210        220        230        240 
WPKTEPQEME VPPTSGPADF FSSPEMWISS LPMTDLEIQF YYRGKEMGQT MTVSNPQGCR 

       250        260        270        280        290        300 
LFYGDLGPMP NQEELFGPIT LEQVRFPGTE QIVNEKQKLF TSRLLDVMDR GLILEVSGHA 

       310        320        330        340        350        360 
IYAIRLCQCK VYWSGPCSPS PTTPNLIERQ KRVKLFCLET FLSDLISHQK GIITKQPPYE 

       370        380        390        400        410        420 
IYLGFGEEWP DGKSKERKLI IVQIIPIVAR MIIEMFTGDS TRSFDSGSIR LQISIPDIKD 

       430        440        450 
NIVSHLKHLY RLLQNHQGPD AWPLMQPQNM HLAQMLQAQ

« Hide

References

[1]NIH - Xenopus Gene Collection (XGC) project
Submitted (NOV-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Embryo EMBL AAI08594.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC108593 mRNA. Translation: AAI08594.1.
RefSeqNP_001081215.1. NM_001087746.1.
UniGeneXl.1273.

3D structure databases

ProteinModelPortalQ2VPM3.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID397715.
KEGGxla:397715.

Organism-specific databases

CTD397715.

Phylogenomic databases

HOVERGENHBG105715.
KOK10154.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
2.60.200.10. 1 hit.
InterProIPR019817. Interferon_reg_fac_CS.
IPR001346. Interferon_reg_fact_DNA-bd_dom.
IPR019471. Interferon_reg_factor-3.
IPR017855. SMAD_dom-like.
IPR008984. SMAD_FHA_domain.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF00605. IRF. 1 hit.
PF10401. IRF-3. 1 hit.
[Graphical view]
PRINTSPR00267. INTFRNREGFCT.
SMARTSM00348. IRF. 1 hit.
[Graphical view]
SUPFAMSSF49879. SMAD_FHA. 1 hit.
PROSITEPS00601. IRF_1. 1 hit.
PS51507. IRF_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ2VPM3_XENLA
AccessionPrimary (citable) accession number: Q2VPM3
Entry history
Integrated into UniProtKB/TrEMBL: January 10, 2006
Last sequence update: January 10, 2006
Last modified: May 29, 2013
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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